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SCNpilot_expt_300_bf_scaffold_24_curated_24

Organism: scnpilot_dereplicated_Thiobacillus_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(22999..23901)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator; K03717 LysR family transcriptional regulator, transcriptional activator of nhaA id=12496278 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 301.0
  • Bit_score: 591
  • Evalue 5.10e-166
LysR family transcriptional regulator; K03717 LysR family transcriptional regulator, transcriptional activator of nhaA similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 295.0
  • Bit_score: 464
  • Evalue 2.90e-128
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 295.0
  • Bit_score: 494
  • Evalue 9.10e-137

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Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGTTGAACTACAAACATCTGCATTACTTTCAAACCGTCGCCAAGACCGGGGCGATCAACCGTGCGGCCGAAAAGCTCCATCTCACGCCGCAGACCCTGTCGGGACAGATCGGCGCTTTCGAGACCCGCCTGGGCGTCGCGTTGTTCCGCCGCAGCGGCCGCCGTCTGGAGCTGACCGATGCCGGCCGTACCGCGCTGGCCTACGCCGACGAGATTTTTCATGTGGGTGCCGAGCTGGAGGAGGCGCTGAGCAACCGCATGGCCACTCCGGTCCACCCCTTTCGCGTCGGTATCGCCGACGCGGTGCCCAAGGCGATCGCCTGGCAGCTACTCGCCCCCGCGCTCGCCCTGCCCGAACCGGTCAAACTCGTATGCCGGGAAGACCGGCTGGAGACGCTGGCTGCCGAGCTGTCGATCCACCGGCTCGACATCGTGCTCGCCGACCGGCCGCTGCCCTCCAACATGGACATTCGCGGCTACAGCCACCCTCTGGGCGAATGCGGCATCGCCTTTCTTGCCGCAAAGCCGCTGGCGCAGACACTCCCGAGCGAATTCCCCGCCTGCCTGGACGGCACCCCTCTGCTGATTCCGGGCGAGGAGAATGCGCTGCGCGCACCGCTGCTGCGCTGGCTGGAAAAGAAAAGCCTGACGCCGACGATCGTCGGCGAATTCGACGACAGCGCGCTGATGAGCGCATTCGGCCAGGCCGGTGTGGGGGTTTTCCCCGCACCGCTCACAGTGGCCCCCATGGTCATGCGGCAATACGACGTGGTCGAGCTGGGGCGCACGAGCGACATTCGCGAACGCTATTTTGCGATCTCGGTGGAACGCCGGCTGTCGCATCCGGCAGTGGTCGCGGTGAGCGAGGCCGCACGCAGGAATCTGGCCGAAACCCCGGTCTGA
PROTEIN sequence
Length: 301
MLNYKHLHYFQTVAKTGAINRAAEKLHLTPQTLSGQIGAFETRLGVALFRRSGRRLELTDAGRTALAYADEIFHVGAELEEALSNRMATPVHPFRVGIADAVPKAIAWQLLAPALALPEPVKLVCREDRLETLAAELSIHRLDIVLADRPLPSNMDIRGYSHPLGECGIAFLAAKPLAQTLPSEFPACLDGTPLLIPGEENALRAPLLRWLEKKSLTPTIVGEFDDSALMSAFGQAGVGVFPAPLTVAPMVMRQYDVVELGRTSDIRERYFAISVERRLSHPAVVAVSEAARRNLAETPV*