ggKbase home page

SCNpilot_expt_300_bf_scaffold_827_curated_18

Organism: scnpilot_dereplicated_Thiobacillus_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 11132..11599

Top 3 Functional Annotations

Value Algorithm Source
transmembrane protein id=12498607 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 156.0
  • Bit_score: 301
  • Evalue 4.20e-79
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 155.0
  • Bit_score: 255
  • Evalue 1.10e-65
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 156.0
  • Bit_score: 262
  • Evalue 5.10e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGAATGCACTTCGTAGAAACGTACTTAAAGGCGCCACTGGCGCGGGCACCCTTGCTGTGGCCGTGGCTGCCGGCCTGCTGAAGCCCACGCAGGCATTGGCGGAATGGAACAAGTCCGCGTTTGAAGCCAAGAACGTCGGCGACGCGATGAAGGGCTTGGGCATTTCCGGCCCGGCCGACAGCAAGGACATCACCATCAAGGCCCCGGACATCGCCGAAAACGGTGCCGTGGTCCCGGTTGAAGTCACCAGCGGCATTGCCGGCACCACCGGAATCGCCATCATTGCCGAAAAGAACGGCACCCCCCTGATCGGCGACTTCGCGCTGTCCGGCGGCACCCAGGGCTACATTTCCACCCGCATCAAGATGGGCCAGACCTCGCTGGTGCGCGCGGTCGTCAAGGCTGGCGGCAAGACCTACACCGCAGCCAAGGAAGTGAAAGTCACCATCGGCGGCTGCGGCGGTTGA
PROTEIN sequence
Length: 156
MNALRRNVLKGATGAGTLAVAVAAGLLKPTQALAEWNKSAFEAKNVGDAMKGLGISGPADSKDITIKAPDIAENGAVVPVEVTSGIAGTTGIAIIAEKNGTPLIGDFALSGGTQGYISTRIKMGQTSLVRAVVKAGGKTYTAAKEVKVTIGGCGG*