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SCNpilot_expt_300_bf_scaffold_827_curated_22

Organism: scnpilot_dereplicated_Thiobacillus_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 14402..15748

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, transcriptional regulator, Fis family id=12498611 bin=THIO_MID species=Thioalkalimicrobium cyclicum genus=Thioalkalimicrobium taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 449.0
  • Bit_score: 877
  • Evalue 6.90e-252
two component, sigma54 specific, transcriptional regulator, Fis family similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 448.0
  • Bit_score: 398
  • Evalue 3.90e-108
Tax=CG_Thiomicrospira_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 45.8
  • Coverage: 448.0
  • Bit_score: 401
  • Evalue 1.60e-108

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Taxonomy

CG_Thiomicrospira_01 → Thiomicrospira → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1347
ATGATGTTCAACCTTCTCATCGCCGAGGACGATGTCGCACAGGCCAAGCTGCTGACCAGGCTGGCGACAGAAGCCGGCTTCGACACCGCTCTCCTGCACGATGGTGCCGCAGCGCTGAACGAGTTGCGCGTAAATCCGCCGGACGCCCTGTTCACCGACCTGCGCCTGCCAGGTGCCGACGGCCTTGCCCTGATCGCCGCCGCCCGCGAAATGGACGCGGCCATGCCGGTGATCCTGGCGACCGGCTTTGCCACCGCGCACAACACCGTTGAGGCCTTCCATCTTGGGGTGACCGACGTCTTGTTGAAGCCGCTGGAACTCGACATGGTGCGGCTAACGCTCACGCGCCTGCACGCCAGTCTGGCCCAGCGTCGCCGCATCGATCAGCTCGCCGCCCAGGTCGCGGCGCACGCCTTCCCGCCGCTGATGGACAGCCGCGCCCCGGCGATGAAGCGATGTCTGCAACTGGCCGCGCAGGTCGCCGCTACTGAACTGCCCATACTGCTGGAAGGCGAAACCGGTTCCGGCAAGGGAGTTCTGGCGGCGCACATCCATGGTTTGTCCGGGCGACGCGACGGACCCTTCCTCACCCTCAACTGTGGCGCCTTGCCCCCCAGTCTGCTGGAGTCGGAGTTGTTCGGTTTCGAGAAGGGCGCATTCTCCGGCGCCAACGCACGCAAGCCCGGCTTGCTGGAACTGGCACATGGCGGCACGCTGTTCCTCGACGAAATCAACAGCACCAGCCTGGATGCTCAGACCCGCCTGCTGCAGTTCATCCAGGACAGGCAACTGATGCGGCTGGGCGGCGTCAAGGCGATCAGCGTCGACGTGCGCCTGATTCTGGCAGCCAACCGGCCGCTGAAGGAGGAGGTGAGCGCCGGCCGCTTCCGTCAGGACCTCTACTTCCGCGTCCAGGTGTTCCCGATTCCTGTGCCGCCCTTGCGCAAGCGGCAGGAGGACATACCAGACCTGGCGGAATACTTCCTGGCGCGCCATGGCCGGGCGCTCAACCCCAATGTTCACGGCATTGCGCAGGATGCGCTCGACCGCCTGCTGAGATACGACTGGCCGGGCAACGTCCGGGAGTTGGAAGGCGCGATTCAACGCAGCCTGGTTCTGGCTTCAGGAAACGCCATCACTTTGCCCGACTTACCCGCAGATATGCGCCCAGCGCCCCGGGGGGCCAGTTCGGCCCCCTTGCCTGGAGATGCGACACTGGAAGAAGTCGAGGCATTCTGGATCCGGCAGGCACTCGAGCGCTGTGGTGGCAACCGCACCCAGGCCGCGCGGCAACTGGGCATCGACCCATCCACTCTATGGCGCAAGCTCAAGGAACAGGACGCCTGA
PROTEIN sequence
Length: 449
MMFNLLIAEDDVAQAKLLTRLATEAGFDTALLHDGAAALNELRVNPPDALFTDLRLPGADGLALIAAAREMDAAMPVILATGFATAHNTVEAFHLGVTDVLLKPLELDMVRLTLTRLHASLAQRRRIDQLAAQVAAHAFPPLMDSRAPAMKRCLQLAAQVAATELPILLEGETGSGKGVLAAHIHGLSGRRDGPFLTLNCGALPPSLLESELFGFEKGAFSGANARKPGLLELAHGGTLFLDEINSTSLDAQTRLLQFIQDRQLMRLGGVKAISVDVRLILAANRPLKEEVSAGRFRQDLYFRVQVFPIPVPPLRKRQEDIPDLAEYFLARHGRALNPNVHGIAQDALDRLLRYDWPGNVRELEGAIQRSLVLASGNAITLPDLPADMRPAPRGASSAPLPGDATLEEVEAFWIRQALERCGGNRTQAARQLGIDPSTLWRKLKEQDA*