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SCNpilot_expt_300_bf_scaffold_827_curated_24

Organism: scnpilot_dereplicated_Thiobacillus_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(17526..17714)

Top 3 Functional Annotations

Value Algorithm Source
xerD; tyrosine recombinase XerD id=12498614 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 63.0
  • Bit_score: 137
  • Evalue 4.20e-30
Integrase family protein {ECO:0000313|EMBL:EEG09669.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 59.0
  • Bit_score: 113
  • Evalue 9.10e-23
xerD; tyrosine recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 59.0
  • Bit_score: 112
  • Evalue 5.90e-23

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Taxonomy

Pseudogulbenkiania ferrooxidans → Pseudogulbenkiania → Neisseriales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 189
ATGGAAACCAATCAATTCCGGGAACCTTGGAACAAGGGCAAGCTGGTCGGTCAAAAGCCACCACTCAAGCCAAAGGACATCTGGGCCATTCGAATCCACCTCCAAAACGAACACCACGTTCGTGGCCTCGCCATGTTCAACCTGGCAATCGACAGCAAGCTGCGTGGCTGCGATCTAGGGCAATGCTGA
PROTEIN sequence
Length: 63
METNQFREPWNKGKLVGQKPPLKPKDIWAIRIHLQNEHHVRGLAMFNLAIDSKLRGCDLGQC*