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SCNpilot_expt_300_bf_scaffold_630_curated_4

Organism: scnpilot_dereplicated_Thiobacillus_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(3863..4240)

Top 3 Functional Annotations

Value Algorithm Source
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=12498642 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 126.0
  • Bit_score: 255
  • Evalue 3.60e-65
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 125.0
  • Bit_score: 253
  • Evalue 2.50e-65
30S ribosomal protein S12 {ECO:0000255|HAMAP-Rule:MF_00403}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 125.0
  • Bit_score: 253
  • Evalue 1.10e-64

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGCCAACCATTAACCAGCTGATCCGCAAGCCGCGCCAGGCCCCGGTGGAAAAAAGCAAGGTGCCGGCCCTGAAAGCCTGCCCGCAACGCCGCGGTGTGTGCACCCGCGTGTACACCACCACGCCCAAGAAGCCGAACTCCGCCCTGCGCAAGGTCTGCAAGGTCAAGCTCACCAGCGGTTTCGAGGTCATCAGCTACATCGGTGGCGAAGGTCACAACCTGCAGGAGCACTCCGTGGTGCTGGTGCGTGGCGGCCGGGTCAAGGATTTGCCGGGTGTGCGCTATCACACCGTGCGCGGCAGCCTGGATACCGCGGGCGTGAAGGACCGTAAGCAGGCGCGTTCGAAGTATGGCGCCAAGCGTCCCAAGAAGGCCTGA
PROTEIN sequence
Length: 126
MPTINQLIRKPRQAPVEKSKVPALKACPQRRGVCTRVYTTTPKKPNSALRKVCKVKLTSGFEVISYIGGEGHNLQEHSVVLVRGGRVKDLPGVRYHTVRGSLDTAGVKDRKQARSKYGAKRPKKA*