ggKbase home page

SCNpilot_expt_300_bf_scaffold_126_curated_30

Organism: scnpilot_dereplicated_Thiobacillus_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(32500..33678)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LuxR family protein id=12496654 bin=THIO_MID species=Roseovarius sp. 217 genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 393.0
  • Bit_score: 769
  • Evalue 1.40e-219
Transcriptional regulator, LuxR family protein {ECO:0000313|EMBL:EAQ23892.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. 217.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 386.0
  • Bit_score: 516
  • Evalue 3.80e-143
Transcriptional regulator, LuxR family protein similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 382.0
  • Bit_score: 361
  • Evalue 2.70e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseovarius sp. 217 → Roseovarius → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGGTGTCACGGGCTGTCATCGATACGCGGCTTTCGGGCCTGATCGACCGCTTCTATGAAGCGGCGGTGGATGACGCGCCATGGATGGGGGTCGCCGCCGATATCGCGGACGTGCTGGCGTCCACCAGCGCCGTGCTCAAACTGCACGGGGGCGACGGTGACGACGTCCAGCTGCTCGAACACACCGACAATTTCAACCTTGCCGACGACCGGCAGTCCTGGGCGCGCCACTGGCACCAGCAGGATTTGTGGGTGGCACGATCTGCCGCTTTCGGCGTGTCGCAGGTTGTCACAGACCATGATCTCGTCACGCCTTCCGAGCAACGGAAAACCGGCTTTTATCGGGAATGGCTTCATGCCCTCGATATCTTTCACATGGTGGGGGCGGTTTTTCCCGGCAGGGATGGCGCGCTGGGCGTGCTGGGCGTCCACCGGCCGGCATGCGCGGGGGCTTATGCCGACAGCGATAGACACAGGCTCGCCACGCTCCTGCCTCATCTGCAGCGTGCCCTGTGGTTGAGCCAAAAGCTCACGAAAAACGCCCTGCGCGGAGCGGTTGCAGATGAAACGTTTCAACGGATCGATGCGGCCGTTTTCGCCGTGGATGCGCGGTGCCGCATCATCGTGGCCAATACGCGCGCAGACGCCTTGCTCCGCGTGCGCGACAGCGGCCTTGCGGGGGGACACGGCCGGTTAAGGCTGGCCGACCCGTTATTGAACCAGCGCATGCAGCAGCAGGTGCAGGCCTGCATCCGGACTGCGCAGGGCCAGGCCGACGCCCTGGGGTCGGTCATGGCAATTCCGCGCCCGGGCCGTCTGCCTCTGACGATGATGGTGTCTCCCTTGCGTCCTGCCGCACTGTTTTCCGCCGGCAACGCTGTCCGCAACCGGCCTCTTGCGCTCGTGATGATCCGTGATCCGGAGGCTTCTGCGCTGGCCCTTGACGGCCTGCGCCGGCTTTTCGGCTTGACGCGTATGGAAGCGGCGGTGGCGGCGGATCTGGCAGGGGGCCTGTCTCCGGGGGCCGTAGCCGAGCGGCGGGGTATCGGGGCAGCCACCGTGCGCGCCCATCTCAAGGCCATTCTCGCCAAGACGGGGACGCATCGCCAGGCGGAAGCCGTTGCCCTGATCGCGCGCAGTGTGGCCGGGCTGGATGCCGATGGCGATTCCTCTTCATGA
PROTEIN sequence
Length: 393
MVSRAVIDTRLSGLIDRFYEAAVDDAPWMGVAADIADVLASTSAVLKLHGGDGDDVQLLEHTDNFNLADDRQSWARHWHQQDLWVARSAAFGVSQVVTDHDLVTPSEQRKTGFYREWLHALDIFHMVGAVFPGRDGALGVLGVHRPACAGAYADSDRHRLATLLPHLQRALWLSQKLTKNALRGAVADETFQRIDAAVFAVDARCRIIVANTRADALLRVRDSGLAGGHGRLRLADPLLNQRMQQQVQACIRTAQGQADALGSVMAIPRPGRLPLTMMVSPLRPAALFSAGNAVRNRPLALVMIRDPEASALALDGLRRLFGLTRMEAAVAADLAGGLSPGAVAERRGIGAATVRAHLKAILAKTGTHRQAEAVALIARSVAGLDADGDSSS*