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SCNpilot_expt_300_bf_scaffold_178_curated_2

Organism: scnpilot_dereplicated_Thiobacillus_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 497..1783

Top 3 Functional Annotations

Value Algorithm Source
TrbI-like protein n=11 Tax=Pseudomonas aeruginosa RepID=U8CD47_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 428.0
  • Bit_score: 848
  • Evalue 3.30e-243
Conjugative transfer protein TrbI {ECO:0000313|EMBL:ETD47589.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 428.0
  • Bit_score: 848
  • Evalue 4.60e-243
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10 similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 428.0
  • Bit_score: 792
  • Evalue 6.70e-227

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1287
ATGAGCCAGGACGACACTCCCGACCTTGCCACGCCGCATCCGGGCAAGGTCGCGCCCGAAGCGGTGGCGCTGCGCGCCCAGCCGCGCCCGGTCACGCGCCTGAATCGGCGCACGCTGGCCATCCTCGTCGGTGGCCTGTCGGTCGTCGTGCTCGGCGCCACGATCTGGTCGCTGCAACCGCAGCGGCGTGGCGCCAATGAGCAGACCGAGCTTTACAACGTCGATCGCGTGTCGAAGTCAGAAGGACTGGATGCGTTGCCGACGGACTACTCGAAGCTGCCGCCGGCCTTGCCGCCCGATGTGCCCGAGCTGGGGCCGCCGCTGCCGGGCGATCTTGGCCCGGCAATCGTGAACTCGCAGCAGCCGGTGACGCCGGCCTATGCGCCACCGGGGCATGATCCTGCGGATGCCTTGCGCAAGGAAGCTGATGCGGCGGCGGCTTCGTCGGTGTTCTTCCGCTCGGGCGGCCAAGGCCAAGCTGCCGCCACGGTGGCGCAGGCGGCGCCGGGTGCGCCTGGTGGTGCAAGCGCGCTCGCGGCTTTCGATCCACTCGGCGCTGGGCCGGCCTCGACCGCGGCCCAGCCTGCCGACCCGACTGCGGTGCAGAACCGGCAAGACCAGAAAGAGGCGTTCCTGAAAGGCGGCTCTACGGAAACCCGCAATTCCGGCAACCTGGCGCTGCCGGCATCGCCTTATCAGGTGATGGCGGGCACGGTGATCGCCGGCGCGCTGGTGACAGGTATCAAGTCGGACTTGCCCGGCGACGTGATCGCCACGGTGACGGAGCCGGTCTTTGACACGGCCACGGGCAAGTTCCTGCTGATCCCGCAGGGATCGCGCATCCTCGGGCGTTACAACAGCCAGGTCAGCTACGGGCAGAGCCGCGTGCAGGTCGTGTGGAACCGGGTCATCCTGCCCGACACGTCATCGCTGACGCTCGACAACCTCGTGGGCACCGACCCGGCCGGCTACGCCGGCCTGGAAGACGACGTGGACTGGCATTGGAATCGCATCGTCGCGGGCGCGGTGCTGACGACGCTGCTAGGCGTGGGCGCCGAGCTTGCCGCGCCGGAGAACCGCCAGGACGGCAACCGCATCGTCATCGCCGGGCGCGACAGCGCACAGGACAGCATCAATCAAGTCGGCCAGGAGATCACCCGGCGCAACATGAACATCCAGCCCACGCTGACCAGCCGGCCCGGCCTGCCGGTGCGGATCATCGTCAACCGGGATCTTGTGCTGCGGCCGTACCAGCCGCTGTTCTTCAACCGGGGAGCCTCGCAATGA
PROTEIN sequence
Length: 429
MSQDDTPDLATPHPGKVAPEAVALRAQPRPVTRLNRRTLAILVGGLSVVVLGATIWSLQPQRRGANEQTELYNVDRVSKSEGLDALPTDYSKLPPALPPDVPELGPPLPGDLGPAIVNSQQPVTPAYAPPGHDPADALRKEADAAAASSVFFRSGGQGQAAATVAQAAPGAPGGASALAAFDPLGAGPASTAAQPADPTAVQNRQDQKEAFLKGGSTETRNSGNLALPASPYQVMAGTVIAGALVTGIKSDLPGDVIATVTEPVFDTATGKFLLIPQGSRILGRYNSQVSYGQSRVQVVWNRVILPDTSSLTLDNLVGTDPAGYAGLEDDVDWHWNRIVAGAVLTTLLGVGAELAAPENRQDGNRIVIAGRDSAQDSINQVGQEITRRNMNIQPTLTSRPGLPVRIIVNRDLVLRPYQPLFFNRGASQ*