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SCNpilot_expt_300_bf_scaffold_178_curated_21

Organism: scnpilot_dereplicated_Thiobacillus_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(18418..20460)

Top 3 Functional Annotations

Value Algorithm Source
cytochrome c biogenesis protein, transmembrane region (EC:1.8.1.8) id=12497732 bin=THIO_MID species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 681.0
  • Bit_score: 1343
  • Evalue 0.0
cytochrome c biogenesis protein, transmembrane region (EC:1.8.1.8) similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 698.0
  • Bit_score: 761
  • Evalue 2.00e-217
Cytochrome c biogenesis protein, transmembrane region {ECO:0000313|EMBL:BAL93576.1}; EC=1.8.1.8 {ECO:0000313|EMBL:BAL93576.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 698.0
  • Bit_score: 761
  • Evalue 9.00e-217

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Taxonomy

Rubrivivax gelatinosus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2043
GTGCTGCTGCTGGCCGCTGCCGCCCAGGCGGCATCGACCGTCGAAACGCCGAACGTGCGCGCGACGCTGCTTGCCTATGCGCCCGAGGGAGTCGCGGCCGGCCAGCCCGTCTGGCTGGGGCTGCAGTTGCGGCATCGTCCCCACTGGCATACCTACTGGAAAAACCCGGGCGATTCCGGGCTGCCGACGACCTTCGAATGGACGCTGCCGGACGGCGTAACGGCGGGCGGAATCGAATGGCCTGCGCCGCGTCCGCTGCCGTTCGGTCCTCTGGTCAACTACGGGTACGAAGGCACGGTGTTGCTGCCGGTGCCACTCGACCTGTCGGACGCGGCGCGCGGCCGCGACTTGCGCGTGCGCCTGCGGGCCGATTGGCTGGTATGCCGCGAGACATGCATACCGGAAAGTGGCGATTTCGAAATCGTCCTGCCGGCCGGCCGGGTGCTGGCGGCCAACCGTGCGGCGTTCGAGACTGCCCGGGCCGCCCGTCCGGCGGTGCTGTCCGATGTCCGGGCCGCGGCGCAGGTGCGCGGCGATACCCTCGAAGTCGAAGTGGCGGGACTGCCTGTTCGCCTGCATGGTGCGACCCTGCGCCTGCTGCCCGAAACGGAAGGCCTGATCGACCACGCCCGGCCCGTTCCGCAAAGCTGGCAGGCCGGGCGCTGGCAGGGGCGGGTTCCGCTGTCGAGCCAGCGCAGTGCGAGCCCGGAACGCCTGGCGATGGTGCTGCTGGCCGGTGCGGACAGTTTCCGCGTCGATGCCCCGGTTGCCGGCTGGCGAGCGGCAATGGATGCGGCTGTTCCCGCCGAACCGGCGCCGGCCGCGTTAGCCGGCTTCGCCGCTGCGCTCGCGCTTGCTTTGGCCGGCGGTGTTTTGCTCAATCTGATGCCTTGCGTTTTTCCCATTCTTTCGCTCAAGGTGCTGGATTTCGCCCGCCACGCTGACGCGCGCCGCACACGGGTGCTGGGGGGGCTGGCCTACACGGTTGGTGTGCTGCTGTCCTTTCTGGCGCTGGCAGGCGCCCTGATCGCCTTGCGCGCGGGCGGCGAGCAGCTCGGTTGGGGTTTCCAGTTGCAGGAACCGGCCTTCGTCGCGGCGCTGGCGCTGCTGTTCACCCTGATCGGACTCAATCTGGCCGGCGTTTTCGAGGTGCGCGGCCTGTTACCCGGTTCAGTGGCGGGGTGGCGCCTGCATCATCCGGCGGCCGATGCCTTCCTGACCGGCGTGCTGGCGGTGGTCGTCGCCTCGCCGTGCACGGCGCCTTTCATGGGGGCAGCGCTGGGATTCGCCTTTACCCTGCCGGCGGCGCAGACCCTGCTGATTTTTGCCGCATTGGGCCTGGGGCTGGCGCTGCCTTACCTGCTGGCCAGTCTGGTGCCGGCGGTGGCGCGTCTCCTGCCGAAGCCGGGGCCGTGGATGGCGCGCTTGCGCACCTTGCTGGCCTTCCCGATGTTCGCCACGGTGGTCTGGCTGCTCTGGGTACTGGGCGTGCAGGTGGGGGTGGCGGGCGTCGTCGGGTTGTTGGGCGTACTGCTGGCCGTCGCATTTGCCGTGTGGGCCTGGGCTCTGCCCGGCCGCAGTCGCATCGGGCTGGGCGTTCCAGCTTTGGCGCTGGCCGCCGCCGCCGGGGTTTGGGCGGCGCCGGCACTGCGTCCGGCGGGAGACGTTCCGCCTGTCGTGGAGGCCGGCTGGATGCCCTGGACACCTGAACGGGAGGCCAGCCTCCGGGCGTCCGGCCAGCCGGTGTTCGTCGATTTCACCGCCGCCTGGTGCATCACCTGCCAGGTCAACAAGCGCACCACGCTGACCGATCCGGCCGTGCTGGCCGATTTCAAACGGGCCGGCGTGGCGTTGCTGCGCGCCGACTGGACTGCGCGCGATCCGGCCATTACGGCGGCACTGGCGCAGCTCGGCCGCAGCGGCGTGCCGGTGTATGTGTTGTATCCGGGCGGTGCGCGCGCACCGCTGGTATTGAACGAACTGCTTTCTCCCGGAGAGATCCGGACCGCGCTCGACCCCCTGAAACGAAAGGAGACCTTATGA
PROTEIN sequence
Length: 681
VLLLAAAAQAASTVETPNVRATLLAYAPEGVAAGQPVWLGLQLRHRPHWHTYWKNPGDSGLPTTFEWTLPDGVTAGGIEWPAPRPLPFGPLVNYGYEGTVLLPVPLDLSDAARGRDLRVRLRADWLVCRETCIPESGDFEIVLPAGRVLAANRAAFETARAARPAVLSDVRAAAQVRGDTLEVEVAGLPVRLHGATLRLLPETEGLIDHARPVPQSWQAGRWQGRVPLSSQRSASPERLAMVLLAGADSFRVDAPVAGWRAAMDAAVPAEPAPAALAGFAAALALALAGGVLLNLMPCVFPILSLKVLDFARHADARRTRVLGGLAYTVGVLLSFLALAGALIALRAGGEQLGWGFQLQEPAFVAALALLFTLIGLNLAGVFEVRGLLPGSVAGWRLHHPAADAFLTGVLAVVVASPCTAPFMGAALGFAFTLPAAQTLLIFAALGLGLALPYLLASLVPAVARLLPKPGPWMARLRTLLAFPMFATVVWLLWVLGVQVGVAGVVGLLGVLLAVAFAVWAWALPGRSRIGLGVPALALAAAAGVWAAPALRPAGDVPPVVEAGWMPWTPEREASLRASGQPVFVDFTAAWCITCQVNKRTTLTDPAVLADFKRAGVALLRADWTARDPAITAALAQLGRSGVPVYVLYPGGARAPLVLNELLSPGEIRTALDPLKRKETL*