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SCNpilot_expt_300_bf_scaffold_178_curated_26

Organism: scnpilot_dereplicated_Thiobacillus_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 27948..29726

Top 3 Functional Annotations

Value Algorithm Source
putative Type II secretory pathway component PulD; K02453 general secretion pathway protein D id=12497737 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 593.0
  • Bit_score: 1141
  • Evalue 0.0
putative Type II secretory pathway component PulD; K02453 general secretion pathway protein D similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 576.0
  • Bit_score: 888
  • Evalue 9.50e-256
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 593.0
  • Bit_score: 968
  • Evalue 3.20e-279

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1779
ATGAACGCTGTGTCGCCCCCCCTTACGAGACGCCTCGCACTGGCAGGATCGCTACTGCTGGCAGGCTGCGTCCCGCCGCCCGCGTTCGACACCTCGCCCGGCCATATCACCCGGACCGACGCCCCTACCGCGCCTGTCGGCGCCCCGCCCGCGCCGGTCCGCGCCGTGCCGGTGCTGCCGCCGCCCCGCGCCGAGCCGCCGGTGCCCACCTACACCGTGGTCGTCAACGATGTGCCGGTGAAGGACCTGCTGTTCTCGATCGCCCGCGACACCCAGTACAACATCGACCTCTATCCGGGCATCGCCGGCAAGGTTTCGCTGAACGCCGTACAGGAACCGCTGCCGGCGATCCTCGACCGCATCGCGCGGCAGGCCAACCTGCGCTACGAGATGAACGGGCGCACCGTGTCGGTCATGCCGGATACGCCCTACGTCAAGACCTATACCGTCAACTACGTCAACGTCGCGCGCAACACCACCTCCAGCGTGGGGGTGGCGGCGCAGATCGCGAGCACGGGCGGCGCCGCGCTCAATACGGCCGGCACCGCCCTCGGCGGCAGCAGTGCCTCGGCCAGCGGCAATTCCTCGCTCACCACCGTGGCCAGCCAGTCCAACAGCGACCTGTGGGCCTTGCTGGCCGAGAACATCCGCACCATCCTCGCCGGCACGCGCGCAGTCACGCAGACCACTGAGGAGCGTGCCGCGCAGATCGACGCGGAGAAAGCCGCACGCGCGGAGCGCGTCTCGCAGGCCGAAGCCGCCAGCAAGGCCGGGGCCGGTGCCGCCAGCCTGTTCTCGACCGCCTTCGCCAGCCAGCCGCAGATCGACGGCAAATACGACGTTGCGGTCAACCCGGTGGCCGGCACCGTGACCGTGCTGGGCACGACCCGCCAGCATGCGCTGGTACAGCAATACATCGACCGCGTCATGCAGTCCACCCAGCGACAGGTGCTGATCGAAGCCACCATCGTCGAGGTCACGCTGAAGGATCAGTATCGCGCCGGCATCGACTGGTCCAAGGCGCTCCAGAGCGCTACCGGCTGGTCCATCAACACGCTCGGCGGCGGCACCAATGCGCTGGCCGGTTCGCTGACGCCCTTCGTCCAGGCGACGTACACCAACAGCGGCAGCAACGGTTTCACGGCGGCGATCGATCTGCTGGAATCCTTCGGCAAGACCCGTGTGCTGTCGAGCCCCAAACTGATGGCGCTGAACAATCAGACCGCGCTCCTGAAAGTCGTGAACAATCTGGTGTATTTCACCATCACCGCCGACACCACGACCGCCGCCAACGTGGCGCAAACCACCACCTTCACGTCCACCCCCCAGACCGTGCCGGTCGGTGTCGTCATGTCGGTGCTGCCGCAGATCAACGAAAACGGCATGGTGTCGCTGACCGTGCGCCCGACCATTTCGCGCCAGGTCGGCACGGTCGAAGACCCCAATCCGGAGCTGAAGCGGAACAACCTCAATATCAGCAACCGCATTCCCGTCATCCAGGTGCGCGAAATGGAATCGCTGCTGCAGGTCAAGAGCGGGCAGACCGTCGTACTGGGCGGCCTGATCCAGGACGACACCAATAACGCCCGCGACGGCGTGCCCGGCCTGTCGCGTCCCGAAGGCATCGGCGCGGTGTTCGGCCAGCACGAACGCACGAACAGCCAGACCGAGCTGGTGATCTTCCTGCGTCCCATCGTCGTATCGAACCCCACACTGGAAAGTGACGAGCTGCGCCAGTTCCAGCGCCTGCTGCCGAGCAGCGCGAGGAGCGTGCCTTGA
PROTEIN sequence
Length: 593
MNAVSPPLTRRLALAGSLLLAGCVPPPAFDTSPGHITRTDAPTAPVGAPPAPVRAVPVLPPPRAEPPVPTYTVVVNDVPVKDLLFSIARDTQYNIDLYPGIAGKVSLNAVQEPLPAILDRIARQANLRYEMNGRTVSVMPDTPYVKTYTVNYVNVARNTTSSVGVAAQIASTGGAALNTAGTALGGSSASASGNSSLTTVASQSNSDLWALLAENIRTILAGTRAVTQTTEERAAQIDAEKAARAERVSQAEAASKAGAGAASLFSTAFASQPQIDGKYDVAVNPVAGTVTVLGTTRQHALVQQYIDRVMQSTQRQVLIEATIVEVTLKDQYRAGIDWSKALQSATGWSINTLGGGTNALAGSLTPFVQATYTNSGSNGFTAAIDLLESFGKTRVLSSPKLMALNNQTALLKVVNNLVYFTITADTTTAANVAQTTTFTSTPQTVPVGVVMSVLPQINENGMVSLTVRPTISRQVGTVEDPNPELKRNNLNISNRIPVIQVREMESLLQVKSGQTVVLGGLIQDDTNNARDGVPGLSRPEGIGAVFGQHERTNSQTELVIFLRPIVVSNPTLESDELRQFQRLLPSSARSVP*