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SCNpilot_expt_1000_bf_scaffold_403_curated_11

Organism: scnpilot_dereplicated_Thiobacillus_5

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(11676..13430)

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 584.0
  • Bit_score: 1044
  • Evalue 0.0
succinate dehydrogenase subunit A (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 584.0
  • Bit_score: 1044
  • Evalue 0.0
succinate dehydrogenase flavoprotein subunit n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D2950 similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 584.0
  • Bit_score: 1056
  • Evalue 0.0

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1755
GTGAACCGGCGGCGTTTCGATGCCCTCATCGTCGGCGGCGGCGGCGCGGGCCTGCGCGCCGCGCTCGAACTGGCGCGCTCCGACTACAAGGTCGCGGTGGTGTCCAAGGTCTTTCCCACCCGCTCGCATACGGTGTCGGCGCAGGGCGGCATCACCGCGGCGCTCGCCAACGTCGACGACGACCGCTGGGAATGGCACATGTACGACACCGTCAAGGGCGGCGACTGGCTGGGCGATCAGGACGCCATCGAATTCATGTGTCGCGAGGCGGCGAGCGCGGTCTACGAACTGGAGCACATGGGCCTGCCGTTCTCGCGGCTGGAAAACGGCAGGATCTACCAGCGCCCGTTCGGTGGCCAGTCAAAAAATTTCGGCGGCGAGCAGGCGACACGCACCTGCGCCGCGGCCGACCGTACTGGGCATGCCTTGCTGCACACGCTGTATCAGCAGAATATCAGGCACCGCACCCAGTTCTTCGACGAATACTTCGCGCTCGATCTCGTGCGCGACGCCGCCGGCTATTGCCTCGGCATTACCGCGCTCGACATCGAGACCGGCGAGCCGCTGCTCATCGAGGCGCGCGTGACGCTGCTCGCCACCGGCGGGGCGGGGCGCGTGTTCGGCAACACCAGCAACGCGCTCATCAACACCGGCGACGGACTCGGCATGGTGTTGCGTGCGGGCCTGCCGTTGCAGGACATGGAATTCTGGCAGTTCCATCCCACCGGTATCGCCGGCGTCGGCTGCCTTATCACCGAAGGTGCGCGCGGTGAGGGCGGCTATCTGCTCAACCGGCACGGCGAGCGCTTCATGCAGCGCTATGCGCCACACGTACAGGATCTCGCGGGGCGCGACGTCGTTGCGCGCGCGATCGCCATCGAGATCGCCGAGGGGCGCGGCTGCGGCGCACACGGCGATCATGTCGAGCTCAAGCTCGACCATCTCGGCGAAGCGGCGATCGCGCAGAAGCTTCCCGGCATCCGCGAGCTGTCCATCCGTTTCGCCGGGATCGATCCGGCGCGCGCGCCGATTCCTGTGGCGCCGACCGCGCACTACATGATGGGCGGCATCCCCACCAATCTGCACGGACAGGTCGTCGCCCCCGTGCATTCCGGGCCCGAGGAGCCGGTGCCCGGCCTGTACGCCGTCGGCGAGTGTGCCTGCGTGTCGGTGCACGGCGCCAACCGCCTGGGCGGCAACTCGCTGCTCGATCTCATCGTCTTCGGCCGTGCCGCGGGTCGTCACATGCTGGAAACTTTGCGCGACAACCCGTATCCGCGTCCCCTCCCTGAAGATGCGGCAGAGGCCGGCCGCGCGCGGCTGGCGCGCTGGGAGCGCCAGGGCAGCGAGCGCGTCGCGGCGATCACCACCGATCTGCGCCGCGTCATGCAGAAACATTGTGGCGTGTTTCGTACCGATGCGATGCTGCGGGAGGGACTCGCCGAACTGGACGGGCTCGCGGCGCGCCTGGCACAGGCGGGGCTCGACGACCGCAGCCGCGTGTTCAACACCGCACGCATCGAGGCGCTGGAGCTGGAAAACCTTCTGCTCGTGGCGCGTGCCACACTGGTTTCCGCGCTCGATCGCACGGAAAGCCGGGGTGCCCACACGCGCGAGGATTTCCCCCAACGCGACGACGCGCACTGGCTGAAGCATACGCTGTACATGCGCGAAGGCGACCAGGTGGACACCAAACCAGTGCGGCTGAAACCGCTGACGGTGGAGTCGATCCGGCCGGGGGAAAGGGTGTATTGA
PROTEIN sequence
Length: 585
VNRRRFDALIVGGGGAGLRAALELARSDYKVAVVSKVFPTRSHTVSAQGGITAALANVDDDRWEWHMYDTVKGGDWLGDQDAIEFMCREAASAVYELEHMGLPFSRLENGRIYQRPFGGQSKNFGGEQATRTCAAADRTGHALLHTLYQQNIRHRTQFFDEYFALDLVRDAAGYCLGITALDIETGEPLLIEARVTLLATGGAGRVFGNTSNALINTGDGLGMVLRAGLPLQDMEFWQFHPTGIAGVGCLITEGARGEGGYLLNRHGERFMQRYAPHVQDLAGRDVVARAIAIEIAEGRGCGAHGDHVELKLDHLGEAAIAQKLPGIRELSIRFAGIDPARAPIPVAPTAHYMMGGIPTNLHGQVVAPVHSGPEEPVPGLYAVGECACVSVHGANRLGGNSLLDLIVFGRAAGRHMLETLRDNPYPRPLPEDAAEAGRARLARWERQGSERVAAITTDLRRVMQKHCGVFRTDAMLREGLAELDGLAARLAQAGLDDRSRVFNTARIEALELENLLLVARATLVSALDRTESRGAHTREDFPQRDDAHWLKHTLYMREGDQVDTKPVRLKPLTVESIRPGERVY*