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SCNpilot_expt_1000_bf_scaffold_489_curated_14

Organism: scnpilot_dereplicated_Thiobacillus_5

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(13411..14214)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein id=12498043 bin=THIO_MID species=Novosphingobium aromaticivorans genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 258.0
  • Bit_score: 235
  • Evalue 6.30e-59
xcsC; type II secretion system protein C; K02452 general secretion pathway protein C similarity KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 264.0
  • Bit_score: 87
  • Evalue 6.70e-15
Tax=CG_Beta_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 33.8
  • Coverage: 260.0
  • Bit_score: 123
  • Evalue 6.40e-25

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Taxonomy

CG_Beta_01 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGCCGCACCTGCCCCCTGCCTTGGCCGATACCCTGCGCCGCGCGTTCCGGCGCGGGTTGCCGGGTGTCAACCTGCTGTTGCTGTTGACGCTGGCGGCGCTGCTGGCCCATTGGACCTGGCGTTTCGCCGCGCCGCAGTCCGTGCAGCCGCCGGCCGCCGGGCATGGCGACGCGCGCGCGGATACCGGCCTCGTCCAGCTGCGAGCGCTCGGCCTGTTCGGCGGAAGCCGGGTGGCCGGCGCGCAGGGCGCGGTGCCCACCGCGCTCGGCTTCAAATTGCGTGGTGTCTTTGCCGCGCCGGCAGGACGTCCCGCGATGGCCTTGCTGAGTACCGAGGGCGGCGAGCAGGCGGTGGTGCGCGGCGACGAAATCCAGCCGGGCGTGGTGCTCGAAGAGGTGGCGGCCGACCATGTCATCCTCAGCAACCGCGGCGTGCGCGAACGGCTCGATCTCGAGACGGGCGGCCAGCCGTCGGCGGCGGCGGCGCGCGGGGACGTTGCGCTGACGCGCGAGGACATCAGCCGGGCGCTCGCCAATCCGCAATCGCTGGGTGTGCAGGTGGGTCCGCAGACCAACCCGCTGGCTGGCATGCAACTGGTTCGCGTGGAGGCGGGCGGGCTCGCCGCGCGGATGGGGCTGCAAACCGGCGATACCCTGCGCATGGTCAACGGCATGCCGGTCGCCAATGCCCAGGATCTGGCCCGGCTGCTGTCGGACGCCGGGAATGTCGAGCGCATCACCCTGGTGGGCGAGCGCCAGGGCATGCCGCTTACACTCTCTTACAGGCTGCAACAACAACGATGA
PROTEIN sequence
Length: 268
MPHLPPALADTLRRAFRRGLPGVNLLLLLTLAALLAHWTWRFAAPQSVQPPAAGHGDARADTGLVQLRALGLFGGSRVAGAQGAVPTALGFKLRGVFAAPAGRPAMALLSTEGGEQAVVRGDEIQPGVVLEEVAADHVILSNRGVRERLDLETGGQPSAAAARGDVALTREDISRALANPQSLGVQVGPQTNPLAGMQLVRVEAGGLAARMGLQTGDTLRMVNGMPVANAQDLARLLSDAGNVERITLVGERQGMPLTLSYRLQQQR*