ggKbase home page

SCNpilot_expt_1000_bf_scaffold_667_curated_24

Organism: scnpilot_dereplicated_Thiobacillus_5

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 31063..31368

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S30P / sigma 54 modulation protein id=12493136 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 102.0
  • Bit_score: 170
  • Evalue 1.20e-39
30S ribosomal protein S30P / sigma 54 modulation protein similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 101.0
  • Bit_score: 143
  • Evalue 3.00e-32
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 101.0
  • Bit_score: 151
  • Evalue 8.30e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGAAAACACCGCTGCAGATCACTTTCCGCGACATGGAGCGCTCGGATGCGCTGGAAACCCACATCCGCGAAAAGGCGGAGAAGCTCGAACAGTTCTTCGCCGACATCGTGAGTTGCCGCGTCGTCGTCGAACAGGCCGCGAAGCACCAGCAGCAGGGCAAGCCCTTCAACGTGCGCATCGAACTTGGCGTCCCGGGCAAGACGCTCATCATCGACAAACAGGTCCACGAGGATGCCTACGTGGCCCTGCGCGACGCCTTCGACGCTGCCAAACGCCAGCTGGAAGATTACGCGCGGCAGTTGTGA
PROTEIN sequence
Length: 102
MKTPLQITFRDMERSDALETHIREKAEKLEQFFADIVSCRVVVEQAAKHQQQGKPFNVRIELGVPGKTLIIDKQVHEDAYVALRDAFDAAKRQLEDYARQL*