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SCNpilot_expt_1000_bf_scaffold_593_curated_5

Organism: scnpilot_dereplicated_Thiobacillus_5

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 2487..3452

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 311.0
  • Bit_score: 556
  • Evalue 6.10e-156
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 311.0
  • Bit_score: 556
  • Evalue 2.70e-155
Pseudouridine synthase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKL6_THIDA similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 311.0
  • Bit_score: 556
  • Evalue 1.90e-155

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGGAACGAGACAAGGACGATTCGACCGGGGATTATAAGGGAAATCGGGAGGGCGACGTCCGCGAACTCGTCATCCCGAATGACCAGGGCGGGTTGCGCCTGGACCAGGCGCTGTCGGCGCTGCTGCCGGAGTTTTCGCGCAACCGCATCCAGAACTGGATTCGCGCGCGCAGGATTTCGGTGGACGAGGCCTGGGGCACGACGAAGATGAAAGTCAGCGGCGGCGAGGCGGTGCGGGTCGAGGTCGAGCCCGATCCGGGCGCTACGCCCGACGCGCCGGAAGCCATCCCGCTCGACGTGGTGTTCGAAGATCCCCTGTTGCTGGTGATCAACAAGCCGGTCGGTCTGGTGGTGCATCCGGGCAGCGGCAATCCGCGCGGCACGCTGCTCAATGCCCTGCTGCATCGCGTGCCGCAGGTCGCCGAGCTGCCGCGCGCGGGCATCGTGCACCGGCTCGACAAGGACACTTCCGGCCTGCTCGTCGTTGCCAAGACGCTGCAGGCGCACACCGATCTCGTGCGCCAGTTGCAGGCGCGCACCGTCAAGCGCGAATACCTCGCCCTGGTGTATGGCGAGATCGACCACGGCGGAACGATCAATGCGCCGCTGGCGCGCGACCCGTTCAACCGCACCCGGCGCGCGGTGCACAGCATGGGCAAGGAAGCGATCACGCATTACGAGGTGGTCGAGCGCTTCCCGGGCGTGACCCTGGTGCGCTGCATGCTGGAGACCGGACGCACCCATCAGATTCGTGTCCACATGCAGCACATCGGCCATCCGCTGGTGGGCGAGACGGTGTATGCCGCCAGCCGCCGCAGCCATTTGAAGATCCCGTTTCCGCGCCAGGCGCTGCACGCCGAGAAGCTCGGGCTGACGCATCCGCGCACCGGCGCGTCCATGCACTGGGAGTGCCCGCTGCCCGCGGATTTCGCTGCCTTGCTCGAAGCATTGCGCCAAGACAGCTAG
PROTEIN sequence
Length: 322
MERDKDDSTGDYKGNREGDVRELVIPNDQGGLRLDQALSALLPEFSRNRIQNWIRARRISVDEAWGTTKMKVSGGEAVRVEVEPDPGATPDAPEAIPLDVVFEDPLLLVINKPVGLVVHPGSGNPRGTLLNALLHRVPQVAELPRAGIVHRLDKDTSGLLVVAKTLQAHTDLVRQLQARTVKREYLALVYGEIDHGGTINAPLARDPFNRTRRAVHSMGKEAITHYEVVERFPGVTLVRCMLETGRTHQIRVHMQHIGHPLVGETVYAASRRSHLKIPFPRQALHAEKLGLTHPRTGASMHWECPLPADFAALLEALRQDS*