ggKbase home page

SCNpilot_expt_1000_bf_scaffold_593_curated_14

Organism: scnpilot_dereplicated_Thiobacillus_5

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 16024..16968

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoS n=1 Tax=Thiobacillus thioparus RepID=UPI0003782783 similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 316.0
  • Bit_score: 545
  • Evalue 3.30e-152
RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 316.0
  • Bit_score: 533
  • Evalue 5.40e-149
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 317.0
  • Bit_score: 545
  • Evalue 3.60e-152

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGAGCACAGACCCCAACGACGAAGCCGACGAGCTGGCACCGGAGGAAGCCGAGGCGGGCGACGCACCCGCGACCGATTCAGCGGAGGATCTCGCCAACGCGATTCTCGACGAACCGCAGGTCGACGTCACCCAGCTCTATCTCAACGAGATCGGTCAGGCCCCCTTGCTCACCGCGGAAGAGGAAGTCGCCCTGGCGCGTCGCACTGTGCAGGGTGACTTCGAGGCGCGCCAGATCATGATCGAGCGCAACCTGCGCCTCGTCGTCAACATCGCCAAGCACTACGCCAACCGCGGATTGACGCTGCTCGATCTGGTCGAGGAGGGCAACCTCGGCCTCATCCATGCGCTGGGAAAATTCGATCCCGAGCGCGGCTTTCGCTTTTCCACCTACGCCACGTGGTGGATCAGGCAGAACATCGAGCGCGCCATCATGAACCAGTCGCGCACCATCCGCCTGCCGGTACACGTGATCAAGGAACTCAACATCTACCTGCGTGCGCAGCGCCACCTGGAGGCGCACGGCGTCGTCGACCCCGGTCTCGATGACATCGCTGCACTCACCGGCCATCCGGTGGAGGACGTGCGCCGCATCATGCAATTGAATGAACGCGTCGCCTCGCTCGATGCGCCGCTCGAGGTGGATCCCTCGCTCTCGCTCGGTGAGGCGATTGCCGACGACAATGCCCAGTTGCCGGAGGAAATGCTGCAACTGGAGGAAATCGAGCACCACGTCCACGAGTGGCTCGGGCAGCTCAACGACAAGCAGCGCTGGGTGATCGAACGACGCTTCGGTCTCAACAACTTCGAGGCCTGCACGCTGGAGGATCTGGCGCTGGAACTGCAGGTGACGCGCGAACGCGTGCGCCAGATCCAGATGGAATCCTTGCGCGTGCTGCGGCAGACGCTGAAGCGGCGCGGCGTGTCCAAGGATGAACTGTTCTGA
PROTEIN sequence
Length: 315
MSTDPNDEADELAPEEAEAGDAPATDSAEDLANAILDEPQVDVTQLYLNEIGQAPLLTAEEEVALARRTVQGDFEARQIMIERNLRLVVNIAKHYANRGLTLLDLVEEGNLGLIHALGKFDPERGFRFSTYATWWIRQNIERAIMNQSRTIRLPVHVIKELNIYLRAQRHLEAHGVVDPGLDDIAALTGHPVEDVRRIMQLNERVASLDAPLEVDPSLSLGEAIADDNAQLPEEMLQLEEIEHHVHEWLGQLNDKQRWVIERRFGLNNFEACTLEDLALELQVTRERVRQIQMESLRVLRQTLKRRGVSKDELF*