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SCNpilot_expt_1000_bf_scaffold_437_curated_29

Organism: scnpilot_dereplicated_Thiobacillus_5

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 32554..33924

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase; K02558 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-] id=12496320 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 463.0
  • Bit_score: 767
  • Evalue 6.00e-219
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase; K02558 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-] similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 454.0
  • Bit_score: 757
  • Evalue 2.50e-216
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase {ECO:0000313|EMBL:AAZ98525.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 454.0
  • Bit_score: 757
  • Evalue 1.10e-215

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGCACCTCCACATTCTCGGCATCTGCGGCACCTTCATGGGCGGCATTGCCGCCATCGCCCGCGCCGCCGGACATACCGTCACCGGCTGCGATGCCAACGTGTACCCGCCCATGTCGGACCAGCTGCGCGCGCTCGGCATCGAACTCATCGAAGGCTGGGATGCCGGCCAGGCCGATATCGGCGCCGACATCTTTGTGGTCGGCAACGTCGTCGCGCGCGGCAGGCAGCCGCTGATGGAAGCCATCCTCGACCGTGGCCTGCCGTACACTTCCGGTCCGCAGTGGCTCGCCGACACCATGCTCCGCGACAAATGGGTGCTCGCGGTCGCCGGCACCCATGGCAAGACCACCACCAGCGCAATGCTGGCGTGGATCCTCGAGGACGCGGGGCTCACGCCGGGTTTTCTCATCGGCGGCATCCCGCAGAACTTCGGCCTGTCGGCGCGGCTGACCGACAGCCCCTTCTTCGTGATCGAGGCCGACGAGTACGACACCGCGTTCTTCGACAAGCGTTCCAAGTTCGTCCACTACCGCCCGCGCACCGCCATCCTCAACAATCTCGAATACGACCACGCCGACATCTTTCCCGACCTCGCGGCGATCGAAACGCAGTTCCATCATCTGGTGCGCACCGTGCCCGGCAACGGGCTGATCGTCGCCAACGGCCGCGATGCCAACCTCGACCGCGTGCTGGCGCGTGGCGCGTGGACACCGGTAGAGCGATTCGGCAGCGACGCCGGCTGGCAGGCGGGAACGCCCGACGCGGACGGCGCTTTCGACGTCAGCCTGGGTGGCGTTTTGCAGGGCCGCGTGCACTGGGCTCTGTTCGGCGAACACGAGCGCATGAACGCACTCGCCGCCATCGCCGCCGCGCGTCACGCTGGCGTGCCCGCCGCCGCCGCGATCGACGCGCTGGCGCGTTTCGAGAACGTGAAACGGCGCATGGAAGTGCGCGGCAGCGTCGGCGGCATCACCGTGTACGACGACTTCGCCCACCACCCCACCGCGATCGCCACGACCATCGAGGGCCTGCGCCGCAAGGTCGGCGCGGCGCGCATTCTCGCCGTGCTGGAACCGCGCTCCAACACGATGAAGCTCGGCGTGATGAAGGCGCAACTGCCGGCCAGCCTCACCGGCGCCGACCAGGTCTATTGCTATGGCGCCGACCTCGGCTGGGATGCGCACGCGGCGCTCGCCCCGCTGGGCGACAGGGTGCGCGTGTTCGACGACCTCGGCACCCTCGTCGCAGGGCTCGCACAGGACGCGCAAGCCGGCGATCAGGTGCTGGTGATGAGCAACGGCAGCTTTGGCGGCCTGCATGGCAAGCTGCTGGACGCGCTGCGCCAGCGCCACGCGGACCAGACCGGCTGA
PROTEIN sequence
Length: 457
MHLHILGICGTFMGGIAAIARAAGHTVTGCDANVYPPMSDQLRALGIELIEGWDAGQADIGADIFVVGNVVARGRQPLMEAILDRGLPYTSGPQWLADTMLRDKWVLAVAGTHGKTTTSAMLAWILEDAGLTPGFLIGGIPQNFGLSARLTDSPFFVIEADEYDTAFFDKRSKFVHYRPRTAILNNLEYDHADIFPDLAAIETQFHHLVRTVPGNGLIVANGRDANLDRVLARGAWTPVERFGSDAGWQAGTPDADGAFDVSLGGVLQGRVHWALFGEHERMNALAAIAAARHAGVPAAAAIDALARFENVKRRMEVRGSVGGITVYDDFAHHPTAIATTIEGLRRKVGAARILAVLEPRSNTMKLGVMKAQLPASLTGADQVYCYGADLGWDAHAALAPLGDRVRVFDDLGTLVAGLAQDAQAGDQVLVMSNGSFGGLHGKLLDALRQRHADQTG*