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SCNpilot_cont_300_bf_scaffold_79_curated_3

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(4223..5725)

Top 3 Functional Annotations

Value Algorithm Source
circadian clock protein, kaic (EC:2.7.11.1); K08482 circadian clock protein KaiC similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 500.0
  • Bit_score: 827
  • Evalue 2.90e-237
Putative circadian clock protein, KaiC {ECO:0000313|EMBL:ADU36978.1}; EC=2.7.11.1 {ECO:0000313|EMBL:ADU36978.1};; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 500.0
  • Bit_score: 827
  • Evalue 1.30e-236
Putative circadian clock protein, KaiC n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3V4_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 500.0
  • Bit_score: 827
  • Evalue 9.10e-237

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1503
ATGACGAATCCACTTGAACCGGTCATCCCGCGAAACGTCGAGCCCACGGGCGTACCTGGCCTGGACGACGTCACAGCAGGGGGTCTGCCGGGCGGGCATGTCTATCTGGTCGAAGGTACTCCGGGCGCTGGCAAGACGACGCTGGGACTTCAATTCCTGCTGCAAGGGCGATCGCTTGGGCAGAAGGGCCTGTATGTCACGCTCTCGGAGACTTCCGAAGAGCTTGCACAGGGGGCGGCATCACACGGCTGGGACCTGGCAGGCGTCGAGATCTTCGACCTTGTGAGCGACGACGACCTGAGCGCCGAAGCCGAGCAGAGCATCCTTCAGCCTTCCGACTTCGAGCTGGGCGAGACGATTCGAGGCGTGATGGCACTCGTGGAGCGCGAAAAGCCGTCCCGCGTGGTTTTCGACAGCCTGTCCGAACTGCGCCTTCTGTCCCAAAGCTCATTGCGATATCGCCGCCAAATCCTGGCGCTGAAGCGGTTCTTTCTCAAGCACGGTTGCACCGTGCTCCTACTGGATGACAAATCCGCCGCGTCCGGGGACATGCATCTCCACAGCATCGCGCACGGCGTGATCCAGCTCGAGCAGAACACCGGCACCTATGGGCCCGACAAGCGCCGCATGCGCGTCGTGAAGCTGCGAGGCGTGAGTTTTCGCGAAGGCGAACACGATTTCACCCTGACGCGCGGCGGCCTGCGGGTGTTTACCCGTCTGGTGGCCAACGAGCACGGCCGAACGCACGCGCAGGAACCGCTGAGTTCAGGCAACCCCGATCTCGACCGGCTCCTGGGCGGAGGCCTGACCCCGGGAACCAACTTGCTGTTCGCCGGACCTGCCGGCGTTGGCAAGACCACGACAGCCGTTTCCTGCGTGCGTGCGAGCCTGCAACTGGGGGGCAAAGCCGCAATCTTTCTCTTCGACGAAGGCACCAAGACCTTGCTGACCCGCTCGCGCGCGCTTGGCATGGGCATCGACGAGTACATCGCGAACGGACAGCTGACCCTGAATTCGGTCGACCCCGCGGAGATATCCGCGGGCCAGTTCTCGCATCACGTGCGAGATGCTGTCGAGCGTCAGGGCGTCACCACCGTGGTGATCGACACGTTGAACGCGTACCTGGTGGCAATGCCCGGCAACAACTTTCTGCTGTTGCAGATGCATGAACTGCTCACCTACCTGAACCTGCAGGGCATTACGACAATCGTCGTGCTTTCTCAACATGGCCTCACCGGCGAGACGCCGAACGACGTGGACCTGAGCTATCTGAGCGACTCGATGCTTCAGTTTCGGTATTTTGAAGCCCGCGGAGAACTTTTGAAGGCCGTCTCGGTTGTCAAGAGCCGCACCAGTGCACACGCGACGACGATCCATCAGTTTCGCCTCGGCCAAGGCGGCCTGGAGATCGGTGAGGCGCTCACTGACTTCGAAGGCGTCATGGCCGGCCTGCCTCGGTATCGGGGTCGAACACGGCTGCTCGGTGACGCCGATGAGGCTTGA
PROTEIN sequence
Length: 501
MTNPLEPVIPRNVEPTGVPGLDDVTAGGLPGGHVYLVEGTPGAGKTTLGLQFLLQGRSLGQKGLYVTLSETSEELAQGAASHGWDLAGVEIFDLVSDDDLSAEAEQSILQPSDFELGETIRGVMALVEREKPSRVVFDSLSELRLLSQSSLRYRRQILALKRFFLKHGCTVLLLDDKSAASGDMHLHSIAHGVIQLEQNTGTYGPDKRRMRVVKLRGVSFREGEHDFTLTRGGLRVFTRLVANEHGRTHAQEPLSSGNPDLDRLLGGGLTPGTNLLFAGPAGVGKTTTAVSCVRASLQLGGKAAIFLFDEGTKTLLTRSRALGMGIDEYIANGQLTLNSVDPAEISAGQFSHHVRDAVERQGVTTVVIDTLNAYLVAMPGNNFLLLQMHELLTYLNLQGITTIVVLSQHGLTGETPNDVDLSYLSDSMLQFRYFEARGELLKAVSVVKSRTSAHATTIHQFRLGQGGLEIGEALTDFEGVMAGLPRYRGRTRLLGDADEA*