ggKbase home page

SCNpilot_cont_300_bf_scaffold_79_curated_12

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 14441..15313

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XMK7_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 290.0
  • Bit_score: 437
  • Evalue 9.00e-120
branched-chain amino acid ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 290.0
  • Bit_score: 437
  • Evalue 2.80e-120
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:AGU53786.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 290.0
  • Bit_score: 437
  • Evalue 1.30e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGTCTGATCTTGCTCAATTCGTACTTTCCGGGCTGACGACGGGCGCTGTGTATGCGCTCGCCGCGCTCGGCTTCACGCTGATCTACAACGCCAGCGGCGTCATCAACTTCGCCCAGGGCGACTTCCTGATGCTCTCGGCGATGGTCGCTGCGACACTGGTGACGCGCCAGGTTCCCTATCCCGTCGCCATCGCGCTGGGACTGCTCGCGACGGTCGTGGTCGGCCTGATGCTCTACCGCTTCGCCATCCGGCCGGCGGGCGACGCGGATGTGGTGACGCTCATCATCATCACCATCGGTGCCTCGATCTTCATCCAGGGGGTGGTGCAGGTGGTGCTGGGCAAGAACCAGCAGGTGCTTGCGCCGTTCAGCGGCGACACACCGCTGAACGTGCTCGGCGCGCGCGTGTTGCCGCAGGCGATGTGGGTGCTGGGCGTGGGCGCGCTGATGGTCGCGGCGGTGGCGGCGTTCTTCAGGTACACGCTCATCGGGAAGGCGACGCTCGCGGTAGCGGCCAACAAGCTGGCTGCCAGCGCCGTCGGCATCCCCACCCGGCGGGTACTCCAGCTGTCCTTCGGCCTGTCCGCGCTGCTGGGCTCCGTCGCGGGGGTCGTCGCCGCGCCGATCACCACGACCGTCTACGACATCGGGCTCATGCTGGGCATGAAGGGGTTCGTCGCCGCGACCCTCGGCGGTCTTGGCAGCGGCCTCGGCGCGGTGGTCGGCGGACTGATCGTGGGGGTGCTCGAAGCCCTGGTCGCAGGCTACATCTCGTCCGCCTACAAGGATGCCGTGCCCTTCGTGATGATCATCGTCATCCTGCTGGTGATGCCGCAGGGCCTCTTTGGCCGCAAGAGCACGGAGCGTGTATGA
PROTEIN sequence
Length: 291
MSDLAQFVLSGLTTGAVYALAALGFTLIYNASGVINFAQGDFLMLSAMVAATLVTRQVPYPVAIALGLLATVVVGLMLYRFAIRPAGDADVVTLIIITIGASIFIQGVVQVVLGKNQQVLAPFSGDTPLNVLGARVLPQAMWVLGVGALMVAAVAAFFRYTLIGKATLAVAANKLAASAVGIPTRRVLQLSFGLSALLGSVAGVVAAPITTTVYDIGLMLGMKGFVAATLGGLGSGLGAVVGGLIVGVLEALVAGYISSAYKDAVPFVMIIVILLVMPQGLFGRKSTERV*