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SCNpilot_cont_300_bf_scaffold_79_curated_18

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(20825..21778)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GLW1_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 303.0
  • Bit_score: 227
  • Evalue 2.00e-56
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 303.0
  • Bit_score: 227
  • Evalue 6.40e-57
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CAN90334.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.9
  • Coverage: 303.0
  • Bit_score: 227
  • Evalue 2.80e-56

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGCCCCTGCCCCACTCCCTGCTGAAGATCGATCTGCACATGCTGGCCTGCCTCGAAGCTCTCATTGCCGAGAGGTCCGTGACGCGCGCGGCGGAAAGAATGGAGATCAGCCAGCCCGCGATGAGCACGGTGCTCGGGCGGCTCAGAGAGGCCCTGCGCGATCCCCTCCTCGTTCGAACGGCCCGCGGGATGGTGCCGACACCTCGGGGCGAGGAGCTCGCCGGCGTCGTGCGCTTTCACCTTCGCGGACTCACCGCCGAGTTGATGGAGAGCGAACCCTTCGACCCCACGACGGCACGGGCGAGCGTCAGTATCGCTACGACCGATTTCACGGGCGTGCTGCTTCTTCCGCGCGTGCTGGCGCGTCTTCGGCAAGAGGCACCGGGCATCCGCATTCATGTTCGTTTGCCGGACCCGAACCACATACGGGAGTGGCTGGAGGAAGGCGAATGCGACATTGCCATCGGCCTTTTCCCGGATCTGGCCGAAGGACTGAGGGTTTCGGAACTCTTCGAGGACCCGTTGAGCTGCATCGTCAGCCGGACACATCCGACGATCCGTGGAACCCTCAGCCTCGCCCAGTACATGGAGTGTTCTCACATCGTGTTCGGGTCACCGTTTGCTCCGATCTCCACCGTGGACCAGGCCATCGATCGCGCCCTGTCTGCGTTGGGTCTGGTGAGGAAAGTAAGCGTGCAGCTGGCTTCCATCCTGCTCCCGCCGCATGTCGCGGCGCAAACCGACCTGATCGCCACGACGCCAACGCGGCTTGCGAAGTACTTTTCGAACATCCTGCCCGTGCGCGTGTTCGATCCTCCCTTCGAAATTCCCGATCTTCGCTTCTCTCTGGTCTGGCACGAAAGAACGCATCGCATGGGGCCCCATCACTTCGTGCGCAGCCTCGTACGCGATATCGCGACCAGTCCCGGCGAAATCCTGCAAACCGTACCGTGA
PROTEIN sequence
Length: 318
MPLPHSLLKIDLHMLACLEALIAERSVTRAAERMEISQPAMSTVLGRLREALRDPLLVRTARGMVPTPRGEELAGVVRFHLRGLTAELMESEPFDPTTARASVSIATTDFTGVLLLPRVLARLRQEAPGIRIHVRLPDPNHIREWLEEGECDIAIGLFPDLAEGLRVSELFEDPLSCIVSRTHPTIRGTLSLAQYMECSHIVFGSPFAPISTVDQAIDRALSALGLVRKVSVQLASILLPPHVAAQTDLIATTPTRLAKYFSNILPVRVFDPPFEIPDLRFSLVWHERTHRMGPHHFVRSLVRDIATSPGEILQTVP*