ggKbase home page

SCNpilot_cont_300_bf_scaffold_79_curated_40

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(45816..46835)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00035C6CB7 similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 339.0
  • Bit_score: 663
  • Evalue 1.20e-187
putative TRAP dicarboxylate transporter DctP subunit similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 339.0
  • Bit_score: 647
  • Evalue 2.10e-183
Putative TRAP dicarboxylate transporter DctP subunit {ECO:0000313|EMBL:AGU49185.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 339.0
  • Bit_score: 647
  • Evalue 9.40e-183

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGACCTCGCTGACCCGCAGGCGTGCCCTGCGCACCCTTTCCGCCCTCCCCGCCGCCGGCATCGTCACGGCGCTGCCGCGCATCGCACGCGCCGCCGAGTTCTCGTACAAGTACGGCAACAACCTGCCGCTGACGCACCCGCTGAACATCCGCGCGCAGGAGGCGGCCGAGCGCATCGCCAAGGAGACCAAGGGCCGCGTCGAGATCAAGATCTTCCCCAACAACCAGCTCGGCGGCGACACCGACATGCTGGCGCAGGTGCGCTCGGGCGGCATCGAGTTCTTCACGCCCTCGGCGCTGGTCATCGCCACGCTGGTGCCGGTGGCGGCCATCAATGCCGTGGGCTTTGCCTTCAATGACTACACCCAGGTCTGGGCCGCGATGGACGGCAAGCTCGGCGCGCACGTGCGCGGCGCCATTGCCAAGGCGCGCCTGTATGCGTTCGAGAAGATGTGGGACAACGGCTTTCGCCAGACCACCAGCAGCAAGGCTGCAGTGGCCACGGCCAAGGACATGGACGGCCTGAAGATCCGCGTGCCCGTCAGTCCGCTGTCGATCTCGATGTTCAAGGGCCTGGGCGCCGCACCGGCGAGCCTGCAGTTCAGCGAGGTGTATTCGGCGCTGCAGACGAAGATCGTCGACGCGCAGGAGAACCCCCTGCCCATCATCCAGGTTGCCAAGCTGTTCGAGGTGCAGAAGTTCTGCTCGCTCACCAACCACATCTGGGACGGTTACTGGTTCATCGCCAACGGCCGCGCCTGGGAAGCGCTGCCCGAAGACCTGAAGACCATCGTCGCCCGCGCCATCAACGACGCCGGCATGCAGCAGCGCGAAGACATCCGCAAGCTCAACGAATCGGTGGTCGGCGACCTGCAGGCCAAGGGCCTGAGCATCAACCGCCCCGCCGCCGAGAGCTTTCGCGCGAAGCTGCGCGAGTCGGGCTTCTACGGCGAATGGAAAGGCCGCTTCGGCCCCGAGGCTTGGGCGCTGCTCGAGGGCGCGGTCGGCAAGCTGGCCTGA
PROTEIN sequence
Length: 340
MTSLTRRRALRTLSALPAAGIVTALPRIARAAEFSYKYGNNLPLTHPLNIRAQEAAERIAKETKGRVEIKIFPNNQLGGDTDMLAQVRSGGIEFFTPSALVIATLVPVAAINAVGFAFNDYTQVWAAMDGKLGAHVRGAIAKARLYAFEKMWDNGFRQTTSSKAAVATAKDMDGLKIRVPVSPLSISMFKGLGAAPASLQFSEVYSALQTKIVDAQENPLPIIQVAKLFEVQKFCSLTNHIWDGYWFIANGRAWEALPEDLKTIVARAINDAGMQQREDIRKLNESVVGDLQAKGLSINRPAAESFRAKLRESGFYGEWKGRFGPEAWALLEGAVGKLA*