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SCNpilot_cont_300_bf_scaffold_79_curated_43

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 49180..50217

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037D03D5 similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 345.0
  • Bit_score: 563
  • Evalue 1.70e-157
Variovorax paradoxus strain MEDvA23 contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35355.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 341.0
  • Bit_score: 543
  • Evalue 2.60e-151
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 343.0
  • Bit_score: 449
  • Evalue 1.10e-123

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1038
ATGCTGAATGGACCGTCCCTCCCCCTTTTCGATGAAGTGCCTCCTTCGACGCACGTCAATGCTTTCAAGCAGTCTTTCGAAGACTGGCTCGCCGATCAGCGCGACGCAGGCTTGTTGCGCCGGGACGGCTCTGCCTCTGTCTATGAGGACATGTGGGAGGCCTTTGCGGCCTGGTGCCTGGGGCAGTCGCCCATCGTGACTCTGTCCTCCCTGCAACTGGCCGATCTGCAGGCGTTCCAGGGCGCACGATTCGGCCGCAAGACCTCGGACCTGTCGCTCACGCCCCGCTATGCCCTGCGCCTGATACGGCTCATTGATCGGGTGCTGCGCCACCATGCCGCGCGGGCCGATGCAGTCGTCAATACGGCTGCTGCGGACTGGATCTTGGCCAATCCCGAAGTCAGGTATGCCGACGCCGCGCACGCCGATCCCCTGCCAGAGTACCTTTCGGTGAGCGAGGCCAGACAGCTCATCACCTTCCTGTCCACCGCCAGGCCGCGGCCTGGCCCCTTGCGAGATGCCCACGCAGCGCTGACCTGGCAGGAGGTGCGCAATCGGTCCTCGGTCGCCTTGCAACTCGGCGCCGGGCTCACTCCGGGAGACGTGCGGGCGTTGATGCTGGACTCGCCGGTCGTGCAAGGCGGCCGCGTGCGCGTGCGGCCCTGGAAGCTGCATGTCCCGGGAGACGGTAATTCGCCCGCGAGAGAAACACCGGTAGCCCCCTGGGCCGCGGAATTGCTGCAGCACTGGCTGATCGTGCGAGCCCAGATGGGCATCGCGGGCCCCTACCTCTTTCCCTCCACACGAACCGGCAAGCAATGGCAAAAGCCCTCCCAGTACGAATGCGCCAAACGCGTGCTTGAAGAGGCCGGGATGGACTCGCGCGAAGGCGGCTCTTTCCGTCTGCGCCACACCTTCGCACTCAGGCAACTGAGGCGAGGCACGCCAGCCGAGCAAGTGGCGCGGTGGCTGGGCATCGAGCCGACGAAGATGAAGCGCTACGAGCGCGTGCTGCCAGGCGTGGTGGAGGTTGTCTGA
PROTEIN sequence
Length: 346
MLNGPSLPLFDEVPPSTHVNAFKQSFEDWLADQRDAGLLRRDGSASVYEDMWEAFAAWCLGQSPIVTLSSLQLADLQAFQGARFGRKTSDLSLTPRYALRLIRLIDRVLRHHAARADAVVNTAAADWILANPEVRYADAAHADPLPEYLSVSEARQLITFLSTARPRPGPLRDAHAALTWQEVRNRSSVALQLGAGLTPGDVRALMLDSPVVQGGRVRVRPWKLHVPGDGNSPARETPVAPWAAELLQHWLIVRAQMGIAGPYLFPSTRTGKQWQKPSQYECAKRVLEEAGMDSREGGSFRLRHTFALRQLRRGTPAEQVARWLGIEPTKMKRYERVLPGVVEVV*