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SCNpilot_cont_300_bf_scaffold_79_curated_48

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(53415..54617)

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VAX2_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 395.0
  • Bit_score: 614
  • Evalue 9.70e-173
Variovorax paradoxus strain MEDvA23 contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31810.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 390.0
  • Bit_score: 618
  • Evalue 9.40e-174
L-carnitine dehydratase/bile acid-inducible protein f similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 395.0
  • Bit_score: 614
  • Evalue 3.10e-173

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
ATGTCGATTTCCCAATCACCCCAACCTCCGCTCTCTGGCTTCAAGGTGCTCGACCTGACCATTGCGCGCGCCGGCCCGACGGCCGTGCGCCTGCTGGCCGACTGGGGGGCCGACGTGACGCGGGTAGAACCGCCGGCGTTGAAGGATCGGGGTTCCGTGACGGGGCGCCGCCGGGGCTCGGACGAGCAGAACCTGCATCGCAACAAGCGCAGTCTTTGCCTCGACCTCAAGACGCCGCAAGGAGCGGACGTGCTCAAGCGCCTGATTGCGCGCAGCGACGTGGTGGCGGAGAACTTTCGCTCGGTGGTCAAGGAGCGTCTGGGCCTGACGTACGAACAGCTGAGGAAGATCAATCCGCGCATCATCCTCGCAAGCATCTCGGGCTTCGGCCAGGACGGCCCCTACAGCGATCGGCCGGGCGTCGACCAGATCGTGCAGGGCATGTCCGGCTTGAGCTCCGTGACCGGAGAACCCGGACGCGGCGCTGTGCGCACCGGCATCGCCATCTCCGACACCACTGCCGGGATGTTCCTGGGACAGGGCATCCTGCTTGCGCTGCTGCATCGCGAGCGCACGGGGGAGGGGCAATGGGTTCACACGTCCCTGATCGAGGGGATGCTCAACAAGCTCGACTTTCAGGGTGCGCGCTACACGGTGGCGGGCGAGATACCGGTGCAGGAAGGCAATGCACACCCGACACAGGTACCCATGAGCACCTTCGATGCCAGCGATGGACAGGTCAACATCTGCGCGAGCACGCAGTACATGTGGGCGGGATTTTGCGAGGCGCTCGGTGCGCAGAAGCTCCACGACAACCCCGACTACAAGGCGTTCGAGTCGCGCGTTGCAAATCGCCGCCAGCTCGACACCGAAGTCAATGAAGTGACGCGGAAGTTCACCGTCGCGGAACTCGTTGCCCGGCTGAACCCGGCTGGCGTGCCCTGCGGTCCGGTCTACAACATCGGGCAGGCTTTCGAAGATGCGCAGGTCAAGCACCTGCGCATGACGCGCCCGGCGAAGCACCCGGTGCTTGGCGAGGTCAACCTGATCCGTTCACCGATCAACCTTTCGGCGTTTCCGCACCCCGAGTATTTCCATCACGCGGCCCCCGATCCCGGCGAGCAGACCGACATCCTGCTCGAAGAGCTGGGCTACAGCCGTGATGCGATCGAAACGATGAAGAGCGCGGGAGCAGTCGAATGA
PROTEIN sequence
Length: 401
MSISQSPQPPLSGFKVLDLTIARAGPTAVRLLADWGADVTRVEPPALKDRGSVTGRRRGSDEQNLHRNKRSLCLDLKTPQGADVLKRLIARSDVVAENFRSVVKERLGLTYEQLRKINPRIILASISGFGQDGPYSDRPGVDQIVQGMSGLSSVTGEPGRGAVRTGIAISDTTAGMFLGQGILLALLHRERTGEGQWVHTSLIEGMLNKLDFQGARYTVAGEIPVQEGNAHPTQVPMSTFDASDGQVNICASTQYMWAGFCEALGAQKLHDNPDYKAFESRVANRRQLDTEVNEVTRKFTVAELVARLNPAGVPCGPVYNIGQAFEDAQVKHLRMTRPAKHPVLGEVNLIRSPINLSAFPHPEYFHHAAPDPGEQTDILLEELGYSRDAIETMKSAGAVE*