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SCNpilot_cont_300_bf_scaffold_79_curated_59

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 66192..67091

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XIX2_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 297.0
  • Bit_score: 517
  • Evalue 7.10e-144
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 297.0
  • Bit_score: 517
  • Evalue 2.20e-144
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU52837.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 297.0
  • Bit_score: 517
  • Evalue 1.00e-143

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGGCTACACCGGACCTTCGAACCCTTCGCTATTTCGTGGCCGTCGCCGAGGAGCGCAGCGTCGGCAGGGCTGCCCGCCGGCTCAACATGGCGCAGCCGCCGCTCTCGGTGCACATCAAGAACCTGGAGGCGGCCGTGGGCACGCCCCTGTTTCGCAGGGCGGCGCACGGCATGGAGATCACCGATGCGGGCAATGCACTGTTCCGGCGCGCGAAAGAGGCACTTCTGCTGGCCAACGAGGGCTTCGACGCCGCGCGCGCCATCGGATCGGGCAACCGGGGCCGGCTCACCATCGGCACGATGGTCGTGCTGTCTTATCTCGTGTTGCCGAGGCTCGAGAACGAGCTGCGGCGCAGGCTGCCGGAGGTGGAGATCCAGTATGTGGAGCTGAATGCCGTCAACAATGTCTCGGCCCTCACCGACTCGGACGTGTCAGTGGCGATCTGCATTCCGCCCATTGCGCAGGCGGGCATTGCGACGCAGCGCATCGGCAGCCAGCCGCTGATGCTTGCGGTGCGCGTCGACTCTCCGCTGGCGCGGCTGACCAGCGTTCCGCTGGCGCGCCTCTCGGGCCTGGCGCTCATCGGACTGCCGGTTCCCGAGGGCGATGTCGACAAATCGGTCGTTGCGTCGCTGCTGCGGCGGCACGATGTCAGCATGCCGATTGCCCAGCGGGTCGAGACGATGGTCTCGGCACTGGCGCTGGTTCTGGCAGGCAAGGGCGTCGCGATCCTGCCTGCCTGCGCTCAGATCGGCCGCCCCCCTGGCGTGGTGTTCAGGCCCTTGCGAAACGTCGACGCCGCAATGGAGATTGCGGCCTGCTGGCGCAACGATTGGGAAAGTCCGTTGATCGCCCCGTTCCTGGCTTGTGCGCGCACAGCCCTGCAAGAGCCGACGTAG
PROTEIN sequence
Length: 300
MATPDLRTLRYFVAVAEERSVGRAARRLNMAQPPLSVHIKNLEAAVGTPLFRRAAHGMEITDAGNALFRRAKEALLLANEGFDAARAIGSGNRGRLTIGTMVVLSYLVLPRLENELRRRLPEVEIQYVELNAVNNVSALTDSDVSVAICIPPIAQAGIATQRIGSQPLMLAVRVDSPLARLTSVPLARLSGLALIGLPVPEGDVDKSVVASLLRRHDVSMPIAQRVETMVSALALVLAGKGVAILPACAQIGRPPGVVFRPLRNVDAAMEIAACWRNDWESPLIAPFLACARTALQEPT*