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SCNpilot_cont_300_bf_scaffold_380_curated_19

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(19358..19942)

Top 3 Functional Annotations

Value Algorithm Source
Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD n=1 Tax=Variovorax sp. CF313 RepID=J2JIW7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 188.0
  • Bit_score: 325
  • Evalue 3.40e-86
Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD {ECO:0000313|EMBL:EJL67850.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 188.0
  • Bit_score: 325
  • Evalue 4.70e-86
PgdA-like protein similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 182.0
  • Bit_score: 292
  • Evalue 7.60e-77

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGCCCCATGAGAAGACGACGGCGCACAGCCGCTTTCCCGAGATGCACGACGACACGCCGCCGCCGAGCCGACGCCGCTCCTGGGGCCAGCCCGAGGTGGAGGAGCCGATCATCGACGCCGCGCGCATCTCGCTGAGCGCCTTCGGCAACGGCCGCTCGCCGCAGCGCACGATGGCCATGTACCTGTGGCTGCGCGTGCTGCGCCCGGCCGTGACCATCGCCATCTGGTTCTGCGCCATCTGGTACGCCTGGCCCTACGTGCTGGGCGCGCGCTCGCAGCCCGAGGTGCTGCATCTGCTGGGCCTGTACGCGCTGGTGATCGGCGTGATCCTGGTGTCGATGCTGGTGATGGCGCCGTGGCGCCGCCATCAGCAAAAGCGCGAAGCGCCGCCCGACCAGGAGCAGTCGTCGCTGTTCGCGCTGGCCTCGTACATCGAGGTGCCGCCCGCGCGCCTGTCGACCTGGCAGCGCACTCGGCAACTGCTGGTGCACCACGACCATGACGGCCACCTGCGCGACGCCACCGACACCGCGCCGGGCGCGCTGGAGCCCGAGCCGCTGCAACGCGCCGCGGCCCGGCGCTGA
PROTEIN sequence
Length: 195
MPHEKTTAHSRFPEMHDDTPPPSRRRSWGQPEVEEPIIDAARISLSAFGNGRSPQRTMAMYLWLRVLRPAVTIAIWFCAIWYAWPYVLGARSQPEVLHLLGLYALVIGVILVSMLVMAPWRRHQQKREAPPDQEQSSLFALASYIEVPPARLSTWQRTRQLLVHHDHDGHLRDATDTAPGALEPEPLQRAAARR*