ggKbase home page

SCNpilot_cont_300_bf_scaffold_380_curated_21

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(21206..23275)

Top 3 Functional Annotations

Value Algorithm Source
pgaB; poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB (EC:3.5.1.-) similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 692.0
  • Bit_score: 1111
  • Evalue 0.0
Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB n=1 Tax=Variovorax sp. CF313 RepID=J2SQM8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 688.0
  • Bit_score: 1190
  • Evalue 0.0
Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB {ECO:0000313|EMBL:EJL67852.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 688.0
  • Bit_score: 1190
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2070
ATGCGAACGACCGACGACAACCCCATGACCTTCCTGCGCGCGGCCATGCTGTGGCTGGTGCTCGCCGCGGCATCGGCACTGGCGCTGCCCGCCTTCGCGCAGCCGCTGCCGCCCGCGGACCCCGACGACGGGCTGAGCTTTCGCGTGCTCTCCTTCCACGACGTGCGCACCGGCGTGCGCGCCAGCTTCGAGCAGTCGCCGGACGAAACGGCCATCGACGACAGCACCCTGGCCGAGGTGTTCGCCTGGCTGCAGTTCAGCGGCTACCACCCGGTGAGCCTGCAGCAGATCGTCGACGCGCGCGCCGGCGGCAAGCCGCTGCCCGCACGGCCCGTGCTGCTGACCTTCGACGACGGCTACCGCAGCGCCTACACCAAGGTGTTTCCGCTGCTCAAGCGCTACAACTACCCCGCGCTGTTCGCGCTGGTGACGAGCTGGCTCGACGTGCCCGAAGGCCAGCTGGTGCACTGGGGCGACAAGCCCGCGCCGCGCGAGAACTTCCTGCTGTGGCCCGAGGTCGCCGAGATGGCTCGCTCCGGCCTGGCCGAATTCGCGAGCCACACCGACGCGATGCACACCGGCATCCTCGCCAATCCGCAGGGCAACATGCTGCCGGCCGCGGCCACGCACCGCTACGACCCCAAGACCGGCCGCTACGAAGACGACGACGCCTACGTGCGCCGCGTCGAGGCCGACCTGCGCCGCAGCCGCGAGATCATCGAGGCGCGCACCGGCGCCAGGGTGCGCGCCACCGTGTGGCCCTACGGCGCCTACAACACGGCCGCGCTGGAAGCCTCGGCGCGCGCCGGCATGCCCATCACATTCACGCTCGACGACGGCGCCAACAGCCCCGACGTGCCGCTCACCCGCATCCGCCGCGCGCTGGCCGCCTACGACAACAAAGCGCCCGAATACGCGCAGCTGCTGCGCAACCCGGTGGGTGGCGAAGTGCGGCAGGTGAACCGCGTGATGCACGTCGACCTCGACTACGTGTACGACCCCGACCCGGCCCAGCAGGAGCGCAACCTGTCGGCGCTGATCGACCGGGTGGCCGCCGTGCGCCCGCGCTCGGTGTTCCTGCAGGCCTACGCCGACCCCGACGGCGACGGCGTGGCCAACGCGCTGTACTTCCCCAACCGCCACCTGCCGATGCGCGCCGACCTGTTCGGCCGCGCCGCCTGGCAGCTGCGCACCCGCACCGGCGTGAAGGTGTACGCATGGATGCCGGTCACCGCGTTCCGGCTGCCGGCGTCGAACCCGCTGGCCACGCACACGGTGATGGCGCAGGGCGGCAAGATGCCGGCCGACCGCTACCACCGCCTCACGCCCTTCGACCCCGCGGTGCGCACGCTGGTCGGCGACATCTACGAAGACCTGGGCCGCTACACCTTCTTCGAGGGCGTGCTGTTCCACGACGACGCGACGCTCTCGGACGACGAAGACGCCAGCCCCTCCGCGCTCGCCACCTATGCGAAGTGGGGCCTGCCGCCCGATGTGGCCGCGATCCGCGCCGACCCGGCGCTGATGGCGCGCTGGACCGCCGCAAAGACGCGCTACCTGATCGACTTCACGCATGAGCTGGCCGCGCGCCTGGGCGCCTGGCGCCCCGCGCTGGAAACCGCGCGCAACCTCTATGCGCGGCCGGTGCTCGAGCCCCAGGCCGAGCAGTGGTTCGCGCAGAACTACGAAGCCTCGCTCGCCGCCTACGACTACGTCGCGCTGATGGCGATGCCGCGCATGGAACAGGAAGCCGATGCCGACGCCTGGCTCGGCCGCCTGGCGCGGCGCGCGGCCGACACGCCGCGCGGCCTCGACGGCACCGTGTTCGAACTGCAGGCGCGCGACTGGCGCACCGGCAAGCCCGTGGCCGACGCGGAGCTGGCGCGCCAATGGACGCTGCTGCAGCGCGCCGGCGTGCGCCACCTGGGCTACTACCCCGACGACTTCCTGAACAACCAGCCCTCGCTCGACGTGGTGCGCCGCGCCATCTCGGTGCGCACGATGCTGCCGCGCGCCCTGGGCGCGTCGGCGGCCGAGACCACGCCGCCGCAAGGAGAGCGGGCCCCATGA
PROTEIN sequence
Length: 690
MRTTDDNPMTFLRAAMLWLVLAAASALALPAFAQPLPPADPDDGLSFRVLSFHDVRTGVRASFEQSPDETAIDDSTLAEVFAWLQFSGYHPVSLQQIVDARAGGKPLPARPVLLTFDDGYRSAYTKVFPLLKRYNYPALFALVTSWLDVPEGQLVHWGDKPAPRENFLLWPEVAEMARSGLAEFASHTDAMHTGILANPQGNMLPAAATHRYDPKTGRYEDDDAYVRRVEADLRRSREIIEARTGARVRATVWPYGAYNTAALEASARAGMPITFTLDDGANSPDVPLTRIRRALAAYDNKAPEYAQLLRNPVGGEVRQVNRVMHVDLDYVYDPDPAQQERNLSALIDRVAAVRPRSVFLQAYADPDGDGVANALYFPNRHLPMRADLFGRAAWQLRTRTGVKVYAWMPVTAFRLPASNPLATHTVMAQGGKMPADRYHRLTPFDPAVRTLVGDIYEDLGRYTFFEGVLFHDDATLSDDEDASPSALATYAKWGLPPDVAAIRADPALMARWTAAKTRYLIDFTHELAARLGAWRPALETARNLYARPVLEPQAEQWFAQNYEASLAAYDYVALMAMPRMEQEADADAWLGRLARRAADTPRGLDGTVFELQARDWRTGKPVADAELARQWTLLQRAGVRHLGYYPDDFLNNQPSLDVVRRAISVRTMLPRALGASAAETTPPQGERAP*