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SCNpilot_cont_300_bf_scaffold_380_curated_25

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(28006..28638)

Top 3 Functional Annotations

Value Algorithm Source
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8J4_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 210.0
  • Bit_score: 385
  • Evalue 3.90e-104
Variovorax paradoxus strain MEDvA23 contig_44, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29622.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 210.0
  • Bit_score: 386
  • Evalue 3.20e-104
lysine exporter protein LysE/YggA similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 210.0
  • Bit_score: 385
  • Evalue 1.20e-104

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGCTGACCCTCGCCGAAATCGCCTGGTTCGCCCTTGCCTCGCTGCTGCTGGCGCTCACGCCGGGGCCGAACATGATCTATTGCGTCTCGCGCACGCTGATCCAGGGCCGCCGCGCCGGACTGGTCTCGCTGGGCGGCGTGCTGATGGCCTTCCTGGTGCATCTGTTCGCCGCGGCGCTCGGCCTCACGGCGCTGCTGCTGGCCGTGCCGATCGCTTTCGACGCCATCCGCATCGCCGGCGCCGCGTATCTGCTGTGGCTCGCCTGGCAGGCCGTCAAGCCCGGCGGCACCGCGCCCTTCGAGGCGCGCGCGCTGCCGGCCGATCCGCCCGCCAAGCTGTTCCGCATGGGCTTCCTCACGAACCTGCTGAACCCGAAGGTGGCGATGTTCTACCTCTCGTTCTTTCCGCAGTTCATCCACCCCGAGCGCGGCTCGGTGCTGCTGCAAAGCATGCAGCTGGGCGCCGCGCAGATCGCCACCAGCGCGGCGGTCAACACGGTGATGATCGTCGGCGCCGCCAGCATCACGGCCGTGCTGTCGCAAAGCGCGGGCTGGCTGCGCGCGCAGCGCTACGTGATGGGCAGCGTGCTGGCCGCGCTGGCGGTGCGCGTGGCGCTGACCGAACGCAAGTAA
PROTEIN sequence
Length: 211
MLTLAEIAWFALASLLLALTPGPNMIYCVSRTLIQGRRAGLVSLGGVLMAFLVHLFAAALGLTALLLAVPIAFDAIRIAGAAYLLWLAWQAVKPGGTAPFEARALPADPPAKLFRMGFLTNLLNPKVAMFYLSFFPQFIHPERGSVLLQSMQLGAAQIATSAAVNTVMIVGAASITAVLSQSAGWLRAQRYVMGSVLAALAVRVALTERK*