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SCNpilot_cont_300_bf_scaffold_200_curated_4

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 1287..1970

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003634045 similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 227.0
  • Bit_score: 431
  • Evalue 5.10e-118
transcriptional regulator domain-containing protein; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 224.0
  • Bit_score: 335
  • Evalue 1.60e-89
Transcriptional regulator domain-containing protein {ECO:0000313|EMBL:ADV01363.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 224.0
  • Bit_score: 335
  • Evalue 7.00e-89

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGTGGCGCTGCCTCATCGTCGAGGACGACGCCGACAACGCCCGCTACATTGCCGAGGGCTTCCGTTCGCTCGGCCACGTGGCCGTGATCAGCCGTGACGGCACCGACGCGCTGGCCCGTGCCACCGGCGAGTCGTGGGACTTGGTGATCCTCGACCGCATGCTGCCCAACGAGGTCGACGGGCTGTCCATTCTTTCGACGATGCGCGCGCTCGGCAAGAAGACGCCGGTGCTGGTGCTCAGCGCGCTGAGCGCGCTCGACGAGCGCGTGCGCGGCCTCAAGGCCGGCGGCGACGACTACCTTGCCAAGCCCTTCGCCTTCTCGGAACTCGCGGCGCGGGCCGAGGCGCTGGTGCGGCGCTCGCGCACCGGGCCAGAGATCCGCCTGCTGCAACTGGCCGACCTCACGCTCGATCTCGCGCGCCGCCACGTGGAGCGCGCGGGCCGGCCCATCGCGCTGCAGCCGCGCGAGTTCAGGCTGCTGGCCTACCTGATGATGCATCCGGGCCAGGTGGTCACCCGCACCATGCTGCTGGAGGCCGTGTGGGACTACCAGTTCGATCCGCAGACCAACGTGATCGACGTGCAGGTGAGCCGGCTGCGCGGCAAGCTCGACGCGGGCGGTGCGCCGACGCTGATCCACACCGTGCGCGGCGTGGGCTACACGCTGGCACCGCCGCAATGA
PROTEIN sequence
Length: 228
MWRCLIVEDDADNARYIAEGFRSLGHVAVISRDGTDALARATGESWDLVILDRMLPNEVDGLSILSTMRALGKKTPVLVLSALSALDERVRGLKAGGDDYLAKPFAFSELAARAEALVRRSRTGPEIRLLQLADLTLDLARRHVERAGRPIALQPREFRLLAYLMMHPGQVVTRTMLLEAVWDYQFDPQTNVIDVQVSRLRGKLDAGGAPTLIHTVRGVGYTLAPPQ*