ggKbase home page

SCNpilot_cont_300_bf_scaffold_200_curated_18

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 15232..16272

Top 3 Functional Annotations

Value Algorithm Source
Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Variovorax sp. CF313 RepID=J2K4U6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 343.0
  • Bit_score: 629
  • Evalue 1.50e-177
Response regulator containing a CheY-like receiver domain and a GGDEF domain {ECO:0000313|EMBL:EJL75215.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 343.0
  • Bit_score: 629
  • Evalue 2.10e-177
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 346.0
  • Bit_score: 618
  • Evalue 1.10e-174

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
ATGACGACGACCACCACCCCTTCGATACCGACCATGGAAACATCGCCGCTTGCCCGTACGCTGCGCGAGCAGCAGGGCGCCAACAGCGACCTCGTGCTGATCGTGGACGACGTGCCCGACAACCTCGCGGTGCTGCACGACGCGCTCGACGAATCGGGCTACACGGTGCTGATCGCCACCAACGGCGAGCAGGCCTTGCAGCGCGCCGCGCAGGCCCGGCCCGACATCGTGCTGCTCGACGCCATGATGCCGGGCATCGACGGCTTCGAGGTGGCGCGCCGGCTCAAGGCCGATGCCGCCACGGCGCACATTCCCATCGTGTTTATGACCGGCCTGACCGAGACCGAGCACCTGGTGGCCGCGCTGGAGGCGGGCGGTGTCGACTACGTCACCAAGCCCATCAAGCCGAAGGAAGTGCTGGCGCGCATGAACGTGCATCTGCAGGGCGCGCGCCGCGCCCGTCAGGACGCGCAGCAGGCCGGCCAGGCGCGCAACGCGCTCGATGCCTTCGGCTACGCGAGCATCACCGTGCGGCTGCCCGAGGGGCGGCTGATCTGGCAGACCGTGCTGGCGCGCGACCTGCTGCAGCGCTACTGCGAGACCCGTGCGCCCGAAACGCCGCCCGTCGTGCTCGAGTGGCTGCGCAAGCACGCGCCGGATGCACAGCAGCGCGGCATCGAGCCGCCGCCGCTGTCGATCGCCCAGGGGGCGGGCAGCCTCACGCTGCGGCTGCACCAGCAGACGGGCAGCGACGACGACGGCGACGAGTGGATGATCATCATGCGCGAGGTGTCCGGCACCGGCGTGATCGAGGCCATGAGCCTGAGCCTGAAGCTCACGGCGCGCGAAGCCGAGGTGCTCTACTGGGTGGTCAAGGGCAAGACCAACAAGGACATCGGCGAGATCCTGGGCAGCAGCCCGGCCACCGCCAAGAAGCACCTGGAGCGGGTGTACGTGAAGCTGGGTGTCGAGACCCGCACGGCCGCCGCCGGCGTGGCCATCAAGCGCATCCGGGAGCTGCAGCCGCAGTTCGAGATCTGA
PROTEIN sequence
Length: 347
MTTTTTPSIPTMETSPLARTLREQQGANSDLVLIVDDVPDNLAVLHDALDESGYTVLIATNGEQALQRAAQARPDIVLLDAMMPGIDGFEVARRLKADAATAHIPIVFMTGLTETEHLVAALEAGGVDYVTKPIKPKEVLARMNVHLQGARRARQDAQQAGQARNALDAFGYASITVRLPEGRLIWQTVLARDLLQRYCETRAPETPPVVLEWLRKHAPDAQQRGIEPPPLSIAQGAGSLTLRLHQQTGSDDDGDEWMIIMREVSGTGVIEAMSLSLKLTAREAEVLYWVVKGKTNKDIGEILGSSPATAKKHLERVYVKLGVETRTAAAGVAIKRIRELQPQFEI*