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SCNpilot_cont_300_bf_scaffold_83_curated_6

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 4303..4695

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbC n=1 Tax=Ralstonia pickettii (strain 12J) RepID=B2UAH5_RALPJ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 130.0
  • Bit_score: 247
  • Evalue 6.00e-63
conjugal transfer protein Trbc; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 130.0
  • Bit_score: 247
  • Evalue 1.90e-63
Conjugal transfer protein TrbC {ECO:0000313|EMBL:ACD27772.1}; Flags: Precursor;; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12J).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 130.0
  • Bit_score: 247
  • Evalue 8.40e-63

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Taxonomy

Ralstonia pickettii → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGACGCAGATGATCGTTCCTGCTTTCCGTATTTCTGCAAACCCGCTTGCCCTGCGCTGCCGTCCCGCGCGGCTGGATGGCTTGGCACGCCCAGCCCTGCAGGGCCTGATGCTCGCGGCGCTGATGCTGCTGCTCGCAGGCACCGCGCAGGCCGCCGGTTCCTCGATGCCTTGGGAGGGGCCGCTGCAATCCATCCTGGAGTCGATCCAGGGTCCGGTGGCCCGGATCATCGCGGTCATCATCATCATCGCCACGGGCCTGGCGCTGGCCTTCGGCGATACCTCGGGCGGTTTTCGCAAGCTGATCCAGATCGTCTTCGGTCTGTCGATCGCGTTTGCCGCGTCCTCGTTCTTCCTGTCGTTCTTCAGCTTCTCGGGCGGGGCTGTCGTATGA
PROTEIN sequence
Length: 131
MTQMIVPAFRISANPLALRCRPARLDGLARPALQGLMLAALMLLLAGTAQAAGSSMPWEGPLQSILESIQGPVARIIAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV*