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SCNpilot_cont_300_bf_scaffold_83_curated_15

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(13404..13871)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein MerR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3Z4_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 156.0
  • Bit_score: 280
  • Evalue 1.30e-72
Variovorax paradoxus strain MEDvA23 contig_89, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ21261.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 155.0
  • Bit_score: 282
  • Evalue 4.80e-73
MerR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 156.0
  • Bit_score: 280
  • Evalue 4.10e-73

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGGAGAAAACGCTCCCGCCGATTCCTGTCAAACGCTACTTCACCATCGGTGAGGTCGGCGAACTTTGCGGCGTCAAGCCGCACGTGCTGCGCTATTGGGAGCAGGAGTTCACGCAACTGCGGCCCATGAAGCGGCGCGGCAACCGTCGCTACTACCAGCACCACGAAGTGCTGATGATTCGCCGCATCCGCGACCTGCTCTACGACCAGGGCTTCACCATCAGCGGTGCGCGCAACAAGCTGCAGGAACTGGTGCAGGGCGAGCGTGACCGGCGCAAGGCCGGTGAGTTGCCGCTCGAGGGCATGGAAGCGATCGAGATCGAGCAGGAAGAATTCGACGCGGCCGTGCAAGATGCGCCGGCAACTGTGGCGGCCGTCTCTGCCCCGAAATCGGTCGATCTGTCGCAGCTGCTGAACCTTCGGCGCGAACTCTTTGAAATTCGTGAGCTGCTGACCGTCGGACACTGA
PROTEIN sequence
Length: 156
MEKTLPPIPVKRYFTIGEVGELCGVKPHVLRYWEQEFTQLRPMKRRGNRRYYQHHEVLMIRRIRDLLYDQGFTISGARNKLQELVQGERDRRKAGELPLEGMEAIEIEQEEFDAAVQDAPATVAAVSAPKSVDLSQLLNLRRELFEIRELLTVGH*