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SCNpilot_cont_300_bf_scaffold_83_curated_21

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(18738..19283)

Top 3 Functional Annotations

Value Algorithm Source
translation initiation factor IF-3 n=1 Tax=Variovorax paradoxus RepID=UPI00035C2153 similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 183.0
  • Bit_score: 337
  • Evalue 1.00e-89
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 181.0
  • Bit_score: 341
  • Evalue 5.90e-91
translation initiation factor if-3; K02520 translation initiation factor IF-3 similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 182.0
  • Bit_score: 332
  • Evalue 1.10e-88

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGGCCCCGGAAGTCCGCCTGATCGGCCCGGATAACGAGCAATTGGGTGTCGTGAGTCTTGCCGAGGCCTTGCGCCTTGCCGGTGAGCAGGACGTGGATCTGGTGGAGGTCGTTGCTGCGGCCAACCCACCGGTGTGCCGCCTGATCGAGTACGGCAAGTTCAAGTACCACGAGCAGAAGAAGGCGGCCGAGGCGAAGTCGAAGCAGAAGGTCATCGAGGTCAAGGAAATCAAGTTCCGGCCCGGTACCGACGATGGCGACTACAACATCAAGATGCGCAACATCAAGCGCTTTCTTGAGGACGGCGACAAATGCAAGATCACGCTGCGCTTCCGTGGCCGCGAGATCACGCACCAGGAGCTGGGTCTGGCACTGCTGCAGCGCATTCGCGACGAACTGGGCGACCTGATCATGGTCGAGCAGTTCCCGAAGCTCGAAGGCCGGCAGATGATCATGATGATCGCGCCGGGGCGCAAGAAGGCCGGTGGCGGTGCGCCGAAGCCCGCGGCAGACGCGGCGCCGGCGGCAACGCCCGCCACGGCCTGA
PROTEIN sequence
Length: 182
MAPEVRLIGPDNEQLGVVSLAEALRLAGEQDVDLVEVVAAANPPVCRLIEYGKFKYHEQKKAAEAKSKQKVIEVKEIKFRPGTDDGDYNIKMRNIKRFLEDGDKCKITLRFRGREITHQELGLALLQRIRDELGDLIMVEQFPKLEGRQMIMMIAPGRKKAGGGAPKPAADAAPAATPATA*