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SCNpilot_cont_300_bf_scaffold_83_curated_40

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 38015..38893

Top 3 Functional Annotations

Value Algorithm Source
endonuclease n=1 Tax=Variovorax paradoxus RepID=UPI000370798A similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 292.0
  • Bit_score: 582
  • Evalue 2.30e-163
putative xylose isomerase similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 292.0
  • Bit_score: 574
  • Evalue 1.50e-161
Putative xylose isomerase {ECO:0000313|EMBL:AGU49055.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 292.0
  • Bit_score: 574
  • Evalue 6.70e-161

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGCGCGATTTCTCGCAAGATCACGACTGGCTGTCGATCAACACCGCCACGGTGCGCAAGCAGTCGGGCGCCGAGGTGCCGCTGGACCGCATCATCGACCAGTGCGCCGAACGCGGCATCCGTGCGATCAGCCCATGGCGCGACCAGGTGGCGGCTGTCGGCCTCGACAAGGTGGCGAAGCAATTGAAGGCGCACGGCATCGGCCTCTCGGGCTACTGCCGCGGCGGATTCTTCCCCGCGCCCGATGCAGCCTGCCTGAAGGCGGCGCTCGACGACAACCGCCGTGCCATCGACGAAGCGAAGACGCTCGATGCGCCCTGCCTCGTGCTGGTGGTCGGCGCCCTGCCCGGCGCGCTCGACGGCAAAGCGGCCTACAAGGACATCGGCCGCGCGCGCGGCGAAGTACGCGACGGCATCGCCGCATCGCTCGAGTACGCCCGCGAGGTCGGCATGCCGCTGGCCATCGAGCCCCTGCACCCGATGCAGGCGGCCGACCGCGCATGCATCAACACGCTGGAGCATGCGCTCGACCTGTGCGACGAACTCGACGCGGGCAAGAGCGGCATGCTGGGCGTGGCGCTCGACATCTATCACGTGTGGTGGGACCCGAAGCTGCAGCAGCAGATCGCCCGCGCGGGCCGGGAGCGGTTGCTGGCGTATCACGTCTGCGACTGGCTTACGCCTACGCGCGACCTGCTGAGTGATCGCGGGATGATGGGTGATGGCGTGGTCGAGTTGAAGAAGATTCGCGGGTGGGTCGAGGACGCGGGGTTCTCTGGCTTCAGCGAAGTGGAGATTTTTTCGAATCTCGACTGGTGGCGGCGGCCTGGTCACGAGACTTTGGACGTCTGCATCGAGCGGCACAAGAAGGCTGTCTAA
PROTEIN sequence
Length: 293
MRDFSQDHDWLSINTATVRKQSGAEVPLDRIIDQCAERGIRAISPWRDQVAAVGLDKVAKQLKAHGIGLSGYCRGGFFPAPDAACLKAALDDNRRAIDEAKTLDAPCLVLVVGALPGALDGKAAYKDIGRARGEVRDGIAASLEYAREVGMPLAIEPLHPMQAADRACINTLEHALDLCDELDAGKSGMLGVALDIYHVWWDPKLQQQIARAGRERLLAYHVCDWLTPTRDLLSDRGMMGDGVVELKKIRGWVEDAGFSGFSEVEIFSNLDWWRRPGHETLDVCIERHKKAV*