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SCNpilot_cont_300_bf_scaffold_83_curated_51

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(50295..50963)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI0003651DDF similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 221.0
  • Bit_score: 423
  • Evalue 1.40e-115
Variovorax paradoxus strain MEDvA23 contig_89, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ21234.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 218.0
  • Bit_score: 425
  • Evalue 3.80e-116
hypothetical protein; K03975 membrane-associated protein similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 217.0
  • Bit_score: 419
  • Evalue 8.00e-115

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGGAAATCATCAGCTTTCTCGTCGACTTCATCCTGCATGTCGACAAGCACCTCGAGCAATTCGTCATCGCCTACGGCCCGTGGGTCTATGCGCTGCTCTTCCTTATTGTCTTCGTGGAGACGGGCGCGGTCGTGATGCCGTTCCTGCCCGGCGACTCGCTGCTCTTCATCGTCGGCGCGCTGTGCGGCGCGGGGCTCATGAGCTATCCGCTGGCATGCGGCATTCTGATAGCGGCCGCCATCCTGGGCGACCAGTGCAACTATTCGATCGGCCGCTACTTCGGACCGAAGGTGTTCCAGTGGGAGAGCTCACGCTTCTTCAACCGCAAGGCCTTCGACCAGGCGCACGGCTTCTACGAGCGCTATGGCGGGATCACCATCGTGCTCGCGCGCTTCATGCCCTTCATTCGCACCTTCGCGCCTTTCGTAGCCGGTGTGGCGGAAATGAACCGTGCCAAGTTCACGGCGTACAACGTCGGGGGGGCGCTGATCTGGGTGCTGGGCATCGCCACGGCCGGCTACTTCTTCGGCAATCTGCCGCTGGTCCGCCAGCATCTCGACAAGATCATCTGGGCGCTGATCTTCATTCCGGGCCTGCTTGCGATCTACGGTGCGTGGCGTGCCTCAAAGGCAGAGAAGGCGCGCGCGGCGCAAATGCCCGCAGGCTGA
PROTEIN sequence
Length: 223
MEIISFLVDFILHVDKHLEQFVIAYGPWVYALLFLIVFVETGAVVMPFLPGDSLLFIVGALCGAGLMSYPLACGILIAAAILGDQCNYSIGRYFGPKVFQWESSRFFNRKAFDQAHGFYERYGGITIVLARFMPFIRTFAPFVAGVAEMNRAKFTAYNVGGALIWVLGIATAGYFFGNLPLVRQHLDKIIWALIFIPGLLAIYGAWRASKAEKARAAQMPAG*