ggKbase home page

SCNpilot_cont_300_bf_scaffold_83_curated_55

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 55254..55904

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V436_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 217.0
  • Bit_score: 405
  • Evalue 2.80e-110
Variovorax paradoxus strain MEDvA23 contig_81, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22905.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 215.0
  • Bit_score: 406
  • Evalue 3.10e-110
ABC transporter; K02003 putative ABC transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 217.0
  • Bit_score: 405
  • Evalue 8.90e-111

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGACGCTGCGCATTTCAAACCTCGGCAAGCACTACGGCGAGTCCCCTGTCTTCGAGAACGTGACGCTCGCCGTCGAGCCCGGCGAGTTCGTCGCCATCGTGGGCGAGTCGGGTGTCGGCAAGTCGACGCTGCTCAACTGCATGGCCGGTCTCGACAGCTGGGACCAGGGCACGGTCACGCATGACGGCACCGACATCGGCGCGCTGGGCGGCGAAGCCTGCGCGCTCTGGCGCCGCCGCCACGTGGGCTTCGTGTTCCAGGCCTTCCACGTGCTGCCGCACCTGGACGTGGCGCAGAACGTGTCGCTGCCGCTGATGCTGCTGGGCCAGCAGCGCGACGATGGCCGCGTGGCGCACATGCTCGAAGCGGTCGGCCTGTCCGGCATGGGCGCGCGGCTGCCGCAGACGCTGTCGGGCGGCCAGTTGCAGCGCGTGGCCATCGCACGCGCTTTGGTGCACCGCCCCGCCCTGCTCCTGGCCGACGAGCCCACCGGCAACCTCGATCCGGCCACCGCAGCGAAGGTGATGGAACTGCTGATCGGCCAGACCCGCGAGCATGGTGCCTCGCTGGTGCTGGTCACGCACTCCGAAAGCGCCGCAGCCCGCGCGGACCGCCTGCTGCACCTCACGGCCAGCGGCATCCGCGCCTGA
PROTEIN sequence
Length: 217
MTLRISNLGKHYGESPVFENVTLAVEPGEFVAIVGESGVGKSTLLNCMAGLDSWDQGTVTHDGTDIGALGGEACALWRRRHVGFVFQAFHVLPHLDVAQNVSLPLMLLGQQRDDGRVAHMLEAVGLSGMGARLPQTLSGGQLQRVAIARALVHRPALLLADEPTGNLDPATAAKVMELLIGQTREHGASLVLVTHSESAAARADRLLHLTASGIRA*