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SCNpilot_cont_300_bf_scaffold_83_curated_73

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(75334..76326)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI0003688D9E similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 328.0
  • Bit_score: 615
  • Evalue 3.60e-173
Variovorax paradoxus strain MEDvA23 contig_81, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22930.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 326.0
  • Bit_score: 614
  • Evalue 6.60e-173
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 328.0
  • Bit_score: 613
  • Evalue 5.60e-173

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGAACATGAAAAAGATATCCACCGTCGTCTACGCGCTGTTGTTGCTCGCACTGGTGCTGGCGCCGTTCTTCGGCGCCTACCCGGTGTTCGTGATGAAGCTCATGTGCTTCGCGCTGTTCGCAGCCGCCTTCAACCTGCTGCTGGGCTTTACCGGGTTGCTGTCTTTCGGGCACGCGGCGTTCCTCGGCGGCTCGGCATACGTCGCGGGCCACGCGATGAAGGTCTGGGGCCTCACGCCCGAGCTGGGGCTGATCGCGGGCACGCTCACCGGTGCCTTCCTGGGCTGGGTCTTCGGCGTGCTGGCCATCCGCCGCCAGGGCATCTACTTCGCGATGATCACGCTGGCGCTCGCGCAGATGATGTTCTTCGTCGCGCTGCAGGCCAAGTTCACCGGCGGCGAAGACGGCCTGCAGGGCGTGCCGCGCGGCAAGCTCTTCGGCCTGATCGACCTGTCGAGCGACCTCACGATGTACTACGTGGCGCTGGTCATCGTCGTCGCTGCCTTCCTGCTGATCGTGCGCACCATCCACTCGCCGTTCGGGCAGGTGCTCAAGGGCATCAAGGAGAACGAGCCGCGCGCGCTTTCGCTGGGCTACGACGTGAGCCGCTTCAAGCTGCTGGCCTTTGTGATCTCGGCCGCGCTGTCGGGCCTGGCCGGTTCGCTCAAGACGCTGGTGCTGGGCTTTGCCACGCTGTCGGACGTGCACTGGACGGCTTCGGGCCAGGTCATCCTGATGACCCTGGTGGGCGGCCTGGGCACGCTGTCGGGCCCGCTGGTGGGCTCGGCCGTGGTGGTGCTGCTGGAGAACAAGATCGGCGAACTCGGCAGCTTCCTGGCGCGCATCACGACCATCGACTGGTTCAACACGCTGGGCGAATCGGTGACCATGGTCACGGGCCTGATCTTCGTGATCTGCGTGCTGGCGTTCCGCAAGGGGATCATGGGCGAGATCATTGCGTTCATCGAGCGGCGCAAGGGGCGCGTGAAGTAA
PROTEIN sequence
Length: 331
MNMKKISTVVYALLLLALVLAPFFGAYPVFVMKLMCFALFAAAFNLLLGFTGLLSFGHAAFLGGSAYVAGHAMKVWGLTPELGLIAGTLTGAFLGWVFGVLAIRRQGIYFAMITLALAQMMFFVALQAKFTGGEDGLQGVPRGKLFGLIDLSSDLTMYYVALVIVVAAFLLIVRTIHSPFGQVLKGIKENEPRALSLGYDVSRFKLLAFVISAALSGLAGSLKTLVLGFATLSDVHWTASGQVILMTLVGGLGTLSGPLVGSAVVVLLENKIGELGSFLARITTIDWFNTLGESVTMVTGLIFVICVLAFRKGIMGEIIAFIERRKGRVK*