ggKbase home page

SCNpilot_cont_300_bf_scaffold_83_curated_77

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(79934..80641)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J3CRI2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 235.0
  • Bit_score: 449
  • Evalue 2.40e-123
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJL77034.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 235.0
  • Bit_score: 449
  • Evalue 3.40e-123
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 235.0
  • Bit_score: 448
  • Evalue 1.00e-123

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGACCGCCGCACTCGAAATCAAGGGCCTGCAAGCCTGGTACGGCGAATCGCATGTGCTGCACGGCGTCGACATGGTCGTGCAGCCGGGCGAAGTCGTCACGCTGCTGGGCCGCAACGGCGCGGGCCGCACCACCACGCTGCGCGCCATCATGGGCCTGACCGGCGCGCGCAAGGGCAGCATCGAGGTCAACGGCAAAGAGACCATCGGCATGCCGACGCACCGCATCGCGCACCTGGGCATCGGCTACTGCCCGGAAGAGCGCGGCATCTTCGCCAGCCTTTCGTGCGAAGAAAACCTGATGCTGCCGCCGGAGCTGAAGGGTGCGGGGCAGGGCATGTCGGTCGATGAGATCTACGCCATGTTCCCCAACCTGGCCGAGCGCCGCCACAGCCAGGGCACGCGCCTGTCGGGCGGCGAGCAGCAGATGCTGGCCGTGGCCCGCATCCTGCGCACCGGCGCCAAGCTGCTGCTGCTCGACGAGATTTCAGAAGGCCTCGCACCGGTCATCGTGCAGGCGCTGGCCCGCATGATCACCACGCTGCGCGCCAAGGGCTACACCATCGTCATGGTGGAGCAGAACTTCCGCTTCGCCGCGCCGCTGGCCGACCGCTTCTACGTGATGGAGCACGGGCGCATCGCGCTGAAGTTCGGTGCCTCGGAACTCGAAGCCAAGATGCCGGTGCTCACCGAACTGCTCGGCGTCTGA
PROTEIN sequence
Length: 236
MTAALEIKGLQAWYGESHVLHGVDMVVQPGEVVTLLGRNGAGRTTTLRAIMGLTGARKGSIEVNGKETIGMPTHRIAHLGIGYCPEERGIFASLSCEENLMLPPELKGAGQGMSVDEIYAMFPNLAERRHSQGTRLSGGEQQMLAVARILRTGAKLLLLDEISEGLAPVIVQALARMITTLRAKGYTIVMVEQNFRFAAPLADRFYVMEHGRIALKFGASELEAKMPVLTELLGV*