ggKbase home page

SCNpilot_cont_300_bf_scaffold_83_curated_90

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(94242..96275)

Top 3 Functional Annotations

Value Algorithm Source
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 678.0
  • Bit_score: 1291
  • Evalue 0.0
NADH:ubiquinone oxidoreductase subunit L n=1 Tax=Variovorax paradoxus RepID=UPI00036CE368 similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 677.0
  • Bit_score: 1361
  • Evalue 0.0
Variovorax paradoxus strain MEDvA23 contig_34, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31252.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 681.0
  • Bit_score: 1326
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2034
ATGAGCGCAACCCTTTCCGCATCCACATTGCTGGCCGTGCCGCTGGCACCCCTGGTCGGCGCTGCCGTCGCAGGCCTGTTCGGCACCAAGTTCGGCGGCAATCACATCGGCCGCAAGGTCACGCACTCGCTCACCATCCTGGGCGTGCTGGTCGCTTTCATCATCTCGGCCATGACGCTCAAGAGCGTGATCGTCGACGGTGCCCGCTTCAACGCCACCCTTTACGAGTGGATGGTCGTGGGCGGTCTGAAGATGGAAGTCGGCTTCATGGTCGACGGCCTCACCGCCATGATGATGTGCGTCGTGACCTTCGTGTCGCTGATGGTCCACATCTACACCATCGGCTACATGGAAGAAGACGACGGCTACAACCGCTTCTTCGCGTACATCTCGCTGTTCACCTTCTCGATGCTGATGCTCGTGATGAGCAACAACATGCTCCAGCTGTTCTTCGGCTGGGAAGCGGTGGGCCTGGTGTCGTACCTGCTGATCGGTTTCTGGTTCAACAAGCCGACCGCGATCTTCGCGAACATGAAGGCCTTCCTGGTCAACCGCGTGGGCGACTTCGGCTTCATCCTCGGCATCGGCCTGATCGCGGCCTACGCCGGCACGCTGAACTACACCGAAGCCTTCGCCAAGGCAGGCACGCTGGCCGGCATCACGTTCCCGGGCACCGAGTGGATGCTCATCACCGTGATCTGCATCTGCCTGTTCATCGGCGCGATGGGCAAGAGCGCGCAGTTCCCGCTGCACGTGTGGCTGCCCGACTCGATGGAAGGCCCGACGCCCATTTCCGCGCTGATCCACGCGGCAACGATGGTGACGGCCGGCATCTTCATGGTGGCGCGCATGTCGCCGCTGTTCGAACTGAGCGACACGGCCCTGAGCTTCATCCTCGTGATCGGCGCCATCACCGCGCTGTTCATGGGTTTCCTGGGCATCATCCAGAACGACATCAAGCGCGTGGTCGCGTACTCGACGCTTTCGCAGCTCGGCTACATGACGGTGGCGCTGGGCGCCTCGGCCTACTCGGTCGCGGTGTTCCACCTGATGACGCACGCGTTCTTCAAGGCGCTGCTGTTCCTCGGCGCCGGCTCGGTGATCATCGGCATGCATCACAACCAGGACATCCGCTGGATGGGCGGCGTGCGCAAGTACATGCCCATCACCTGGATCACTTCGCTGCTGGGTTCGCTCGCGCTGATCGGCACGCCGTTCTTTGCCGGCTTCTACTCGAAGGACAGCATCATCGAAGCGGTGCACGAAAGCCACCTGTGGGGCGCGAACTTCGCGTACTACGCTGTGCTGGCGGGCGTGTTCATCACGGCGTTCTATTCGTTCCGCATGTACTTCCTGGTCTTCCACGGCAAGGAACGCTACGACCAGAACCCCGACGCGCACCATGACGACCATGGCCACGGTCATGACGATCATGGTCACGGCCATGACCACAAGCCGCACGAGTCGCCCTGGGTGGTCTGGCTGCCGCTGGTGCTGCTGGCCATCCCCTCGGTGGTGATCGGCTTCATGACAATCGAACCGATGCTCTTCGGCGAGTTCTTCAAGAACGCGATCTTCGTGGACGGTGCCAAGCACCATGCCATGAAGGAGCTGGAAGAGGGCTTCCACGGTCCGGTGGCCATGGCCATCCACGGCCTGACGACCGCACCGTTCTGGCTGGCGCTGGCCGGCGTGGTCCTGTCCTGGTACATGTACATGATCAACCCGGCGCTGCCGGCCGCTATCAAGCGTGCCTTCGGCCCGATCTATCGCCTGCTTGAGAACAAGTACTACATGGACTGGTTCAACGAGAACGTCATTGCCCGCGCCACCCGCGCGCTCGGCACCGGCCTCTGGAAGGGCGGCGACCAGGCGCTGATCGACGGCGCCGTCGTGAACGGCTCGTGGAAACTGGTCGGCCGGATTTCGGGTGTGGTGCGCTGGATGCAGTCGGGCTACATCTATCACTACGCCTTCGCGATGCTGCTCGGCATCTTCATCCTGATGACGTACTTCGTCTGGTTCAAACGCTGA
PROTEIN sequence
Length: 678
MSATLSASTLLAVPLAPLVGAAVAGLFGTKFGGNHIGRKVTHSLTILGVLVAFIISAMTLKSVIVDGARFNATLYEWMVVGGLKMEVGFMVDGLTAMMMCVVTFVSLMVHIYTIGYMEEDDGYNRFFAYISLFTFSMLMLVMSNNMLQLFFGWEAVGLVSYLLIGFWFNKPTAIFANMKAFLVNRVGDFGFILGIGLIAAYAGTLNYTEAFAKAGTLAGITFPGTEWMLITVICICLFIGAMGKSAQFPLHVWLPDSMEGPTPISALIHAATMVTAGIFMVARMSPLFELSDTALSFILVIGAITALFMGFLGIIQNDIKRVVAYSTLSQLGYMTVALGASAYSVAVFHLMTHAFFKALLFLGAGSVIIGMHHNQDIRWMGGVRKYMPITWITSLLGSLALIGTPFFAGFYSKDSIIEAVHESHLWGANFAYYAVLAGVFITAFYSFRMYFLVFHGKERYDQNPDAHHDDHGHGHDDHGHGHDHKPHESPWVVWLPLVLLAIPSVVIGFMTIEPMLFGEFFKNAIFVDGAKHHAMKELEEGFHGPVAMAIHGLTTAPFWLALAGVVLSWYMYMINPALPAAIKRAFGPIYRLLENKYYMDWFNENVIARATRALGTGLWKGGDQALIDGAVVNGSWKLVGRISGVVRWMQSGYIYHYAFAMLLGIFILMTYFVWFKR*