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SCNpilot_cont_300_bf_scaffold_83_curated_133

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(142920..143717)

Top 3 Functional Annotations

Value Algorithm Source
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1B2_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 264.0
  • Bit_score: 417
  • Evalue 1.20e-113
polar amino acid ABC transporter, inner membrane subunit; K02029 polar amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 264.0
  • Bit_score: 417
  • Evalue 3.60e-114
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ACS22183.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 264.0
  • Bit_score: 417
  • Evalue 1.60e-113

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGGACCTCGAGGATCCGTCGAGCGAGCCCAGGCGCCGCTCCCGGCTCGGCTCGGCCGTGCTGGTGGTGTGCGTGCTCGCCGGCATCTGGGTGGCGGTGCGCCACTTCTCGGGCGGCGCGTCCGGCACGGCCTACGACTGGGACTTCGGCGTGCTCTGGAGCTACCGGCGCCTGCTTCTCATCGGCCTGGCCTACACGCTGGTGTTCACCGTGGTGTGCGTCGTGCTGGGGCTTGCCATCGGACTGATCACCGGGCTGGGGCGGCTGTCGCGCAACCCCTGGATATCGGCGCCCATTCGTGCCTACATCGAGGTGTTCCGTTGCACGCCGGTGCTGGTGCAGCTCGTGTGGTTCTACTACGCGCTGCCGGTGCTCACCGGGCTCGAAATCTCGGCGGTGGCGGCGGCCACGCTGTGCCTGTCGCTCTACGGCGGCGCCTTCTACTCCGAGATCGTGCGCGGCGGCATCATCTCCATCGACAACGGCCAGGTCGAGGCCGCCCGCGCGCTGGGCATGACGCGCATGCAGCTCATGCGGCGCATCGTGCTGCCGCAGGCGTTCAAGCGCATGGTGCCGCCGCTCATGAGCCAGTCGATCATGCAGCTGAAGAACACTTCGCTGCTGTCGGTGCTGGCCGTGCCGGACCTGCTCTACCAGGGCCAGGTGATCGCGCACGAGACCTATCGCCCGCTGGAGCTCTACACCTTCATCGCGGTGGCCTACTTCGCGGTGCTGCTGCCCGTCACCATCTGGGCCAAGCGCATGGAACTCGGCGCCGGGCCGAAGGAAGAAGCCTGA
PROTEIN sequence
Length: 266
MDLEDPSSEPRRRSRLGSAVLVVCVLAGIWVAVRHFSGGASGTAYDWDFGVLWSYRRLLLIGLAYTLVFTVVCVVLGLAIGLITGLGRLSRNPWISAPIRAYIEVFRCTPVLVQLVWFYYALPVLTGLEISAVAAATLCLSLYGGAFYSEIVRGGIISIDNGQVEAARALGMTRMQLMRRIVLPQAFKRMVPPLMSQSIMQLKNTSLLSVLAVPDLLYQGQVIAHETYRPLELYTFIAVAYFAVLLPVTIWAKRMELGAGPKEEA*