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SCNpilot_cont_300_bf_scaffold_83_curated_148

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(156243..157382)

Top 3 Functional Annotations

Value Algorithm Source
sugar ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00037E3B6B similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 367.0
  • Bit_score: 669
  • Evalue 1.80e-189
ABC transporter; K02023 multiple sugar transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 380.0
  • Bit_score: 643
  • Evalue 5.80e-182
ABC transporter related protein {ECO:0000313|EMBL:ADU38239.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 380.0
  • Bit_score: 643
  • Evalue 2.60e-181

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1140
ATGACGGCGGTCCCTCATTTTCCGGAAAAGCAGAACATGTCCGCAATCAGCTGTCACAACATCATCAAGCGCTACGGCGACACGCAGGTCGTGCACCAGTTCGACCTCGACGTGTCGGACAACGAGTTCGTCGTGTTCCTCGGCCCCTCGGGCTGCGGCAAGTCGACCATCCTGCGGATGCTCGCGGGCCTGGAAGACATCTCCGGCGGCGACCTCATGATCGGCGGCCAGCGCGTGAACGACCTGCCGCCGCAGGAACGCGGCATTGCCATGGTGTTCCAGAACTACGCGCTCTATCCGCACATGAGCGTGCGCGACAACATCGCCTTCGGCCTCAAGCGGCAGAAGGTGCCCAGGGCCGAGATCGATGCACGCATCAAGGAGGTGTCGGACACGCTGGGCCTGGAGCGCTACCTGCAGCGCAAGCCGGCCGAACTGTCGGGCGGACAGCAGCAGCGCGTGGCGATCGCGCGCGCGATGATCAAGACGCCCAAGGTGTTTCTCTTCGACGAGCCCTTGTCGAACCTCGACGCCAAGCTGCGCAACCACATGCGCATCGAGATCGCGCGGCTGCACCAGGCGCTGAAGACCACCACCGTGTACGTCACGCACGACCAGCACGAGGCCATGACGCTGGCCGACCGCATCGTGCTGCTGCGCGACGGGCGCATCGAGCAGGTCGGTTCGCCGCGCGAGATCTTCGAGCGGCCGCGTTCGGCCTTCGTGGCCGGCTTCATCGGCACGCCGCCGATGAACCTGGTCGAGATGCGGGTGCGCGACGCCGGCGGGTACTTCGAGCTGGCGGGCCGCGAGGGCACGGTGCGCGTGGACTCGCGCCGCTTCGCCCTGGAAGGCCGCGAGCGCGTGACCCTGGGCGTGCGGCCCGCGCACCTGCAAGCCGACACGCAGGACGGCCGCGACGGCGGCTTCGCCGGCGAGGTTCAGCTCATCGAATACCTGGGCAACGAGGTGCTGGTGAGCTTCGGGCAGGGCGAGAGCGAAATCGCCGCGCTGATGCCCTCGGCCCTGTGCCCGCGGCTGCGCGACGCGGTGCGCTTCGTGGCCGACCCGGCGCAGGTGCACTTGTTCGACATCGACACCGGCGCCTCGCTGCTGCGCGCCGATAACCCCTTGCATTGA
PROTEIN sequence
Length: 380
MTAVPHFPEKQNMSAISCHNIIKRYGDTQVVHQFDLDVSDNEFVVFLGPSGCGKSTILRMLAGLEDISGGDLMIGGQRVNDLPPQERGIAMVFQNYALYPHMSVRDNIAFGLKRQKVPRAEIDARIKEVSDTLGLERYLQRKPAELSGGQQQRVAIARAMIKTPKVFLFDEPLSNLDAKLRNHMRIEIARLHQALKTTTVYVTHDQHEAMTLADRIVLLRDGRIEQVGSPREIFERPRSAFVAGFIGTPPMNLVEMRVRDAGGYFELAGREGTVRVDSRRFALEGRERVTLGVRPAHLQADTQDGRDGGFAGEVQLIEYLGNEVLVSFGQGESEIAALMPSALCPRLRDAVRFVADPAQVHLFDIDTGASLLRADNPLH*