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SCNpilot_cont_300_bf_scaffold_83_curated_182

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 196901..197917

Top 3 Functional Annotations

Value Algorithm Source
TctC n=1 Tax=Variovorax paradoxus RepID=UPI00037F5303 similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 343.0
  • Bit_score: 557
  • Evalue 1.20e-155
putative Bug-like extracytoplasmic solute binding receptor, TTT family similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 340.0
  • Bit_score: 522
  • Evalue 7.80e-146
Putative Bug-like extracytoplasmic solute binding receptor, TTT family {ECO:0000313|EMBL:AGU50773.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 340.0
  • Bit_score: 522
  • Evalue 3.50e-145

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGACCACCGTTTTCAAGAACGCCTTCGGCGGCGCGCGCCGCCGTCTTGCCGTTGCCGCCGCCTGCGCGGCGCTGCTGCCGTTGGGCCTGGGCCTTGGCGCCACGGCCGCCCACGCGGCCGACGCCCCCTACCCCACCAAGGCGGTGAAGCTGCTCACCAACTTCCCGGCGGGCGGCCCCATCGACATCCTGGCCCGCACGCTGGCCGATGCGCTGCAGAAAGACCTGAAGCAGCCCTTCATCGTCGACAACCGCCCCGGCGCGGGCGGCAACATCGGCGCCGACTTCGTGGCCAAGAGCCCGGCCGACGGCTACACGGTGCTGCTGGGCATCGACACCACCTTCACCATCAACCCGCACCTCTACCCGTCGATGCCGTTCGCGGCCAAGGACCTGAAGCCGCTGATGATCTTCAGCTCTTCGGGCCTGAGCTTCGGCGTGGCCGGCAACGTGAAGGCCAAGACCCTGCCCGAGTTCATCGCGCAGGCCAAGGCGGAGCCCGCCACGTTCAGCTCCGCCGGCAACGGCAGCCCGGGCCACATTGCCGCCGAGATCTTCGCGAGCGAGACCGGCGCGAAGATCACGCACGTGCCCTACAAGGGCAACGCGCCGGCGGTGCTGGCGCTCATGGGCGACGAAGTGCAGGCCGGCATCCTCGCCACGCCGGGGCTGCTGCCGCAGGTGCAGTCGGGCAAGCTGCGCGCCCTGGCCGTGACCGGCCGCCAGCGCTCGCCGCTGCTGCCGCAGGTGCCCGCCGTGGGCGAACTGGGCCTGAAGAACCTGGAGTTCGAGGTGCTCTACCTCGCGATGGTGCCGGCCGCCACGCCCGAGCCCGTGATGCAGACCCTGCGCGCGTCGCTGCAGAAGGCCATGGCGCTGCCGGAGGTCAAGTCGCGCATTGCGGCGCTCGACATGGTGCCGCTCGGCGAAACCGGCACCGCCGCCAGCGACCACCTGGCGGCCAGCCTTGCGCGCTACGGCCGCATCGTCAAGGCCACCGGCATGAAGGTCGACTGA
PROTEIN sequence
Length: 339
MTTVFKNAFGGARRRLAVAAACAALLPLGLGLGATAAHAADAPYPTKAVKLLTNFPAGGPIDILARTLADALQKDLKQPFIVDNRPGAGGNIGADFVAKSPADGYTVLLGIDTTFTINPHLYPSMPFAAKDLKPLMIFSSSGLSFGVAGNVKAKTLPEFIAQAKAEPATFSSAGNGSPGHIAAEIFASETGAKITHVPYKGNAPAVLALMGDEVQAGILATPGLLPQVQSGKLRALAVTGRQRSPLLPQVPAVGELGLKNLEFEVLYLAMVPAATPEPVMQTLRASLQKAMALPEVKSRIAALDMVPLGETGTAASDHLAASLARYGRIVKATGMKVD*