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SCNpilot_cont_300_bf_scaffold_83_curated_189

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 205553..206065

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQP6_DELSC similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 165.0
  • Bit_score: 253
  • Evalue 1.40e-64
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 165.0
  • Bit_score: 253
  • Evalue 4.50e-65
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEF91714.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 165.0
  • Bit_score: 253
  • Evalue 2.00e-64

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Taxonomy

Delftia sp. Cs1-4 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGCCTTCCCCCGCCGCGACAGCCCCGATCGACGCGCTCTACCGGGAGCACCGCGACTGGCTTCAAGGCTGGCTGCGGCGCCGGCTGGGCGACGGCCACACGGCCGCGGACCTGACGCAGGACACCTTCGTGCGGGTCATCAGCGGCGGGCAGGCGCAGGCGATCCAGGAGCCGCGCGCCTACCTGACGACGCTGGCGCAGCGGGTGCTCTACAACTTCTGGCGCCGCCGCGAGCTGGAACGCGCATGGCTCGACGCGCTTGCGGCGCAACCGCAAGAGCTGGCGCCCTCCCCGGAAACCTACGCGCTGGTGCGCGAAGCCGTCGAAACCATCGACCGCTGGCTGGACGGCCTGCCGCCCAAGGTGCGCGAGGCGTTTCTGCTGCGCCGGCTCGAAGGCCTGGCGCACGCGGACATCGCGGTGCGCATGGGCATTTCGATTACGTCGGTCGAGCGGTACGTGAAGCAGGCCATCGTGCATCTGTACACCTGCCCTGCGCAGCTGGAGGCCTGA
PROTEIN sequence
Length: 171
MPSPAATAPIDALYREHRDWLQGWLRRRLGDGHTAADLTQDTFVRVISGGQAQAIQEPRAYLTTLAQRVLYNFWRRRELERAWLDALAAQPQELAPSPETYALVREAVETIDRWLDGLPPKVREAFLLRRLEGLAHADIAVRMGISITSVERYVKQAIVHLYTCPAQLEA*