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SCNpilot_cont_300_bf_scaffold_83_curated_197

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 215965..216540

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, PadR-like family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CTL4_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 203.0
  • Bit_score: 348
  • Evalue 4.80e-93
PadR-like family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 203.0
  • Bit_score: 348
  • Evalue 1.50e-93
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:ACS20202.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 203.0
  • Bit_score: 348
  • Evalue 6.70e-93

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGAGACATTTCCACTTTGGCCATCACCACTGCCGCACCGCGCGCGGCGAACATGAAGACGGCCTTTCCGGCGGTCGCGGACACCGTGGCGGGCGCGGCGGCGGCGGTGGCCGCGTGTTCGGCCACGGCGGCCTGCGCTTCGTGCTGCTGCAGCTCATCGCCGACAAGCCGGCCCACGGCTACGAACTGATCAAGGCCATCGAAGACCGCCTCGGCGGCAGCTACGCCCCGAGTCCCGGCGTGGTCTACCCCACGCTCACGCTGCTCGAGGAGCTTGGCTACCTCAGCGTGGAAACCGCCGACAACGGCGGGCGCAAGCGCTACAGCATCACCGCCAGCGGACAGGAGTTCCTCGCGTCCAACCGCGAAACGGCCGACGCCATGATGGCCCGCATGAGCGGCGGCGTCGACGGCGCCGGCCCGCGCGGCGGACGCCCCCCACAGGTCACGCGCGCCATCGAGAACCTCAAGCTCGCCATGCGCATGCGCCTTTCGGGCACGCCGCTCACGGAACAGCAGGCGCACGACTTCGCCGCCGTGCTCGACAGCGCCGCCCAGCAGATCGACAAGATCTGA
PROTEIN sequence
Length: 192
MRHFHFGHHHCRTARGEHEDGLSGGRGHRGGRGGGGGRVFGHGGLRFVLLQLIADKPAHGYELIKAIEDRLGGSYAPSPGVVYPTLTLLEELGYLSVETADNGGRKRYSITASGQEFLASNRETADAMMARMSGGVDGAGPRGGRPPQVTRAIENLKLAMRMRLSGTPLTEQQAHDFAAVLDSAAQQIDKI*