ggKbase home page

SCNpilot_cont_300_bf_scaffold_116_curated_21

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 38281..40797

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000366CDD3 similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 839.0
  • Bit_score: 1276
  • Evalue 0.0
integral membrane sensor hybrid histidine kinase similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 567.0
  • Bit_score: 229
  • Evalue 3.40e-57
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 26.9
  • Coverage: 783.0
  • Bit_score: 234
  • Evalue 4.70e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Proteobacteria_56_27_curated → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2517
GTGATCGCGACGATTGCGGGTCTTCTGCGGGCACTGTTCTGCTCGGCGCTGATGCTTGTCGTCTGCGGCGCCGCATCGGCAAAGGGCAATCCGGCGCCCCTGACGCAGTCGCCGGGGCTGGCCGTCGACGGGCACAGGATGCTGCAAGGGGACTACCTGATCGAAGACGGCGTTCCGCTGTCGTTGCCCGACGTCACGGCGCTTCCCGGGAGTGCCTGGAAGCGCAGGCCCTGGTCATCCGCCAGCTATGGCTTCGCAACGGCGCCGCACTGGTTCCGAAGCGATCCCTTCACCGCAAGCCCCGACGGATCGGGAACCTTGTTGATCGAGGTGGGCTACCCCTTGCTCGATCACCTCGACCTGTATGTCAGGGTCAACGCGGCGGCTTCCTGGACCCGATGGAGCCTCGGGGACAAGCAGGCCTTCGAGCAACGTCCCCACGACACACCGAGCTTTGTCGTGCCTGTGTCCGTGCAGCCCGGCGACAGGGTCGAGATTCTCGCGAGGGTACAGACCGAAGGCGCGATGCGCTTTCCCCTGAGCGTGTGGCAACCGCGGCAATTCGAGAACGCGGAACGCCGGTCGCTGCTGGTCAACGGCATCTACGTCGGGCTGATGGGAGGAATCTTCTTCTATCACCTCATCATCTTCCTGATCCTTCGCGAGCGCATCTACCTCTACTACATCGGCTGGATCCTGGTGACCTCGGGATTCATCCTGAGCTACAACGGCATCGCGTTCCAGTACCTCTGGCCGCAGGCGACGACATGGAACGACTGGTGCCGGATCGTGTTTCTCTTTCTTGCGACCGGGCTCTTCACGTCCTTCACCATCCAGTTCGTGAGCAATGCCGCAACCGCGCCGCGGCGGTGGCACGCGGCGCCCGTGCTGCTGGCGATCGCCCTGGCGGTGGGAGCGAGCTGGCTGCCTTTTCCCCAGGCCGTGCGCGTGGCTCTGCTGGTCCAGTTCGTGGGCACCCTGGTCTGCTTCGGCCTGGCCATCGGCCCGGCCCGGGCCGGCCATACCTACGCCCGCGTTTTCCTCGTGACGTTCTCGGGCGTGCTGATCGGCGCCGCCCTGCACACGCTGGACATGTTGGGAGTCACGGCGTACTTCGAGACTTCGATCAATTTCGAGGTTGCGCCCCAGGTGGGGTCTGCTTTTTCGGTTCTTCTGTTTTCGCTGGCGTTGGCCCACAGGCTGCTTGAAGAACGCCGCCAACGCTCCATCGCGACGGCGCTTGCGCAGACCAACGCGACACTGGCGGACTCCATGCGCGTGCAGCAGGAGCGCTCCGAGTTCCTGCTGAAAATCAAGGACCGCTTGCGCACCGATGCCGAGCGCCGGGATCAGGACAAGTCCCGATTCCTGGCCGACGCCATCCACGACCTGCGCCAGCCGCTGCAAGTGATCGGGAACGCACTCAACCCCATCGGCGGAGCCATTCGGGCGGGTCACACGGTCAACGCCCTGAACCTGGCCCAGATGGCGACCCGCGCGGCCGGCAACATGCGCTCCCAACTGGCCGCCATCCTGGACCTCTCGCGGCTGGAGTCGGGCTTCGTGAAGGCGGAACTCTCCGACTTCGATCTGGTGACGCTGGTCAGGGACACGGTCGAGCAAACCAGAGCCATCGCCCAGGAAAGCGGCACCTGCGTCGAATTCGATCCGCCCCTGGGGAAGCCGGTGTTCGTGAGGAGCGACCGTCACTTCCTCCAGCGCATTCTTTTGAATCTCGTCAGCAACGGCATCAAGTACCGGTCCGCGGATGGTGGCCGCCGCAGCCACGTGCGCCTTCTCCTGACGACGCACGGCCAACTCACGCACCTGGCCATTCAGGACAACGGCCTCGGAATACCCGAAGAAGTGCTGCAAAGCAACGTCATCTTCAAGCCCTTCTTCCAATTGAACAATCGACACGCCGAAGCGGAGAAGGGCGTAGGCCTGGGCTTGTCGATCGTCTCGGCCCTGCTCGACCTGCTCGACAACCACCAGCTTTCCATCCAGTCCGAGGTGGGCGTGGGAAGCACCTTCACGCTGGAGATTCCGGCATCCGTGATCGCACCGGTCTTCGAGGCCATTCCGCACGACGACTTCATGGCCGGCGGCATCGAAGCAGCCCGCGGAAAGTACGTCGTGCTGCTCGAGGACGATGAACTGGTCAGGCAGTCGCTCGCCGCGGTCTTCAACGCGCACGGGGTCTTGTACGAAGCGTGGGGATCGATCGAAGAAATGCGGCAACAGCTGCCTTTCACCGAGCGGGCTCCCGACGTCCTGCTCAGCGACTATCGCTTGCCGGACGGGAAAACCGCGCTCGATGCGATCGAACTGATGCGCTCGCACTGGAGCGACGTGCCCACGCTCATCCTGACCGGGGAGTCGCTGAATTCGTATGCGCTCACGTCCTTGCGAGGCATCGCGATCTGCTACAAGCCCGTCGCTCCTCTCGACCTGCTACGGCGGATTGCCGCCAGTGCGATGCGCATGGCCGCGCCGTCGAACTTCGGGGTGCTGTAG
PROTEIN sequence
Length: 839
VIATIAGLLRALFCSALMLVVCGAASAKGNPAPLTQSPGLAVDGHRMLQGDYLIEDGVPLSLPDVTALPGSAWKRRPWSSASYGFATAPHWFRSDPFTASPDGSGTLLIEVGYPLLDHLDLYVRVNAAASWTRWSLGDKQAFEQRPHDTPSFVVPVSVQPGDRVEILARVQTEGAMRFPLSVWQPRQFENAERRSLLVNGIYVGLMGGIFFYHLIIFLILRERIYLYYIGWILVTSGFILSYNGIAFQYLWPQATTWNDWCRIVFLFLATGLFTSFTIQFVSNAATAPRRWHAAPVLLAIALAVGASWLPFPQAVRVALLVQFVGTLVCFGLAIGPARAGHTYARVFLVTFSGVLIGAALHTLDMLGVTAYFETSINFEVAPQVGSAFSVLLFSLALAHRLLEERRQRSIATALAQTNATLADSMRVQQERSEFLLKIKDRLRTDAERRDQDKSRFLADAIHDLRQPLQVIGNALNPIGGAIRAGHTVNALNLAQMATRAAGNMRSQLAAILDLSRLESGFVKAELSDFDLVTLVRDTVEQTRAIAQESGTCVEFDPPLGKPVFVRSDRHFLQRILLNLVSNGIKYRSADGGRRSHVRLLLTTHGQLTHLAIQDNGLGIPEEVLQSNVIFKPFFQLNNRHAEAEKGVGLGLSIVSALLDLLDNHQLSIQSEVGVGSTFTLEIPASVIAPVFEAIPHDDFMAGGIEAARGKYVVLLEDDELVRQSLAAVFNAHGVLYEAWGSIEEMRQQLPFTERAPDVLLSDYRLPDGKTALDAIELMRSHWSDVPTLILTGESLNSYALTSLRGIAICYKPVAPLDLLRRIAASAMRMAAPSNFGVL*