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SCNpilot_cont_300_bf_scaffold_116_curated_23

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 42051..42926

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Ralstonia solanacearum RepID=UPI0001817242 similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 286.0
  • Bit_score: 436
  • Evalue 2.60e-119
hth-type transcriptional regulator benm similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 290.0
  • Bit_score: 435
  • Evalue 1.90e-119
LysR family transcriptional regulator {ECO:0000313|EMBL:KFX26606.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ17654.1}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 290.0
  • Bit_score: 435
  • Evalue 6.30e-119

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Taxonomy

Ralstonia solanacearum → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGGACTCCGAATCCCTCAGGATCTTCAGCGCGGTGGCTCGCGAGCTCAGCATCACCCATGCGGCGACCCGGCTGGGCCGGGCCCCGTCCAATGTCACCACCCGCATCCAGCAGCTGGAAGCCGACTTCGGCTGCGAACTGTTCGTGCGAACCGGCAAGCGCATGGCGCTGTCCGCCGCGGGCGAGCGCCTGCTCGACTACGCGCAGCGGATGCTCGCGCTCGAAGAGGAGGCAAGGCATGTGGTCGGCGGCGGCCTCAGCGGTGGGGCGCTGCGTATCGGGAGCATGGAGAGCACGGCCGCCACCCGCTTGCCATCGCTGCTGGCCGGGTATCACGCGAAGTACCCGACGACGCGCCTGGAACTCACGACGGGCCCTTCGAGGCCACTGCTCGAACAGGTCCGCACCGGCCGGCTGGACTGCGCATTCATCGCCTTGCCGCCGTCCTTCAGCGGCGCGGAGTCCCTGGTCGACCTCGGACTGGTGGCAACGACCGTGTGGCGGGAAGACCTGAAGCTGTTGCTCCCCGCCAGCGAATCCAAGGCGCGCCGAGCGGCGGATGTCCGAACGCGTTCGCTGGCCGCGTTCCCGCTCGGGTGCACCTACCGCAACTTCGCGGAAGACCTGCTTGGAACGGCGGGATCGAGCGAATGGACGGTCCAGGAGATGGCGTCCTATCACGCGATGGTCGCGTGCGTGGCCGCAGGCGCCTGCGTCACGCTGCTGCCCGCCAGCGTGCTGGCGATCGCAGATGCTCCTGCTGCGTTGAGAACGCTGAACGCCGGGCACGCGGACACCTTGCTGGTCTCGCGCAGGAACTACGACGTGCCCGCATTCCAGCAACTCGTCGCTCAATTGGCCGGGGGCAAGCCATGA
PROTEIN sequence
Length: 292
MDSESLRIFSAVARELSITHAATRLGRAPSNVTTRIQQLEADFGCELFVRTGKRMALSAAGERLLDYAQRMLALEEEARHVVGGGLSGGALRIGSMESTAATRLPSLLAGYHAKYPTTRLELTTGPSRPLLEQVRTGRLDCAFIALPPSFSGAESLVDLGLVATTVWREDLKLLLPASESKARRAADVRTRSLAAFPLGCTYRNFAEDLLGTAGSSEWTVQEMASYHAMVACVAAGACVTLLPASVLAIADAPAALRTLNAGHADTLLVSRRNYDVPAFQQLVAQLAGGKP*