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SCNpilot_cont_300_bf_scaffold_118_curated_116

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(99419..100276)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 285.0
  • Bit_score: 347
  • Evalue 2.20e-92
dihydrodipicolinate synthase (EC:4.2.1.52); K01714 dihydrodipicolinate synthase [EC:4.2.1.52] similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 269.0
  • Bit_score: 203
  • Evalue 1.20e-49
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LKE1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 281.0
  • Bit_score: 329
  • Evalue 3.40e-87

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Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGGCCACCCCCTTCACCGCGGACCACCGGCTCGACGAGGGCCGCGTGGGCGAGCTGATCGAGAGCTACATCAAGGCCGGCGTGCACGGCATCTCGGTGGCCGGCAGCCAGGGCGAGTTCTTCGCGCTCGAGCGCGACGAGCACATCCGCCTGCTGGAGCTGTCGATGCGCGCCATCGACGGCCGTGTGCCGCTGTACGCGGGCACCGGCGGCGCCACCACGCGCGACGCCATCGCGCTCACACAGGCGGCCGAAGCCATGGGCGCCGACCTGGCGCTGGTGATCACGCCCTACTTCGTGCAGCCCACGCAGGACGAGCTGGTCGCGCACTACACCGCCGTGGCGCGCGCGACAAAGCTGCCGGTGATGCTCTACAACAACCCGCCGCGCACCAGCGTCAACGTGCTGCCGGCCACGCTCGCTCGCTGCATGCGGGCAGCCGACAACATCGTGGGCATGAAGGACTCGGGCGGCGACCTCACGCAGTCGATCGAATACCTGCTGACTGCGCCGCGCCCCGCGCTGCTGTTCTCGGGCCGCGACACCATCGCGCTGTCGATGATGTTCCACGGCGCGCAGGGCACCATCTCGCCGGCCGCCAACGTCTTTCCGGAGCTCATGGTGCGCATGTACGACGCGCTGCGCGCCGGCAACCACGAAGAGGCGCTGCGTTTGTCGAACGTGTTCGCGCCGCTGCGCGCGGCCTGGGCCTGGGGTTCGTTCCCGGTGGTCATCAAGGAGGCCATGACCCTCGCGGGCCGCGGCGCCGGACCGACGCGCCCGCCGGTCGCAGCGCTGCCCGAGAAGCTGCGCGCCGACCTCGAGGCCGTGGTCAAGCGCATCGCAGCCACCGCCTGA
PROTEIN sequence
Length: 286
MATPFTADHRLDEGRVGELIESYIKAGVHGISVAGSQGEFFALERDEHIRLLELSMRAIDGRVPLYAGTGGATTRDAIALTQAAEAMGADLALVITPYFVQPTQDELVAHYTAVARATKLPVMLYNNPPRTSVNVLPATLARCMRAADNIVGMKDSGGDLTQSIEYLLTAPRPALLFSGRDTIALSMMFHGAQGTISPAANVFPELMVRMYDALRAGNHEEALRLSNVFAPLRAAWAWGSFPVVIKEAMTLAGRGAGPTRPPVAALPEKLRADLEAVVKRIAATA*