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SCNpilot_cont_300_bf_scaffold_118_curated_132

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 112180..112911

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI000367AA43 similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 241.0
  • Bit_score: 434
  • Evalue 6.40e-119
Putative membrane protein {ECO:0000313|EMBL:EJL75168.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 241.0
  • Bit_score: 427
  • Evalue 1.10e-116
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 234.0
  • Bit_score: 301
  • Evalue 2.00e-79

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
GTGCGCCTCGACACCCTCTACACCGCCGAGACCCCGGAAGGCATCGCGCTCTCGCTGCGCCCGGCCGGGCTGGTCGCGCGCGGGCTGGCGTACCTGATCGACTTCGCGATCCGGCTCGGCATCTTCGTCGGCATCTCCATCGCGGTCGGCATGCTGGGCAAGATGGGCTTCGGCATCCTGCTGGTCGCGTACTTCTGCCTGGAGTGGTTCTACCCCGTGGTCTTCGAGCTCACGCGCGCTGCGGCCACGCCCGGCAAGCGCGTGATGGGCCTGCGCGTGGTGATGGACTCCGGCCTGCCGGTGACGCCCGCCGCCTCGCTCACCCGCAACCTGCTGCGCGCGGCCGATTTCGTGCCTTCTTTCTACGGCGCGGGCATCGTCTCGATGCTGTGGCGGCGCGACAGCAAGCGGCTGGGCGATCTGGCCGCCGGCACGCTGGTGGTGTTCAGCGACCAGGTGAGCCTGCACGGCGGCGTGCCCGCCGCCGAGCCGCAGGCGCCCGCACGGCCGCTGTCCGCGCGCGAGCAGATGGCCGTCGTCTCATGGGCCGGCCGCGCGACGCGCCTGACGCCCGAGCGCTTCGACGAACTCGCCCGCATCGCGCAGCCGGTGCTGGGCCCCGACACTTCCGCGGGCGGCGGCGCTTCCGCGTCGCAGCGCCTGCTGGGCGTGGCGCAATGGGTGCTGGGCCGGCGCGGCGCAGCGGATGCACGAGGGAGCACGACGCGATGA
PROTEIN sequence
Length: 244
VRLDTLYTAETPEGIALSLRPAGLVARGLAYLIDFAIRLGIFVGISIAVGMLGKMGFGILLVAYFCLEWFYPVVFELTRAAATPGKRVMGLRVVMDSGLPVTPAASLTRNLLRAADFVPSFYGAGIVSMLWRRDSKRLGDLAAGTLVVFSDQVSLHGGVPAAEPQAPARPLSAREQMAVVSWAGRATRLTPERFDELARIAQPVLGPDTSAGGGASASQRLLGVAQWVLGRRGAADARGSTTR*