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SCNpilot_cont_300_bf_scaffold_118_curated_152

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(134308..135564)

Top 3 Functional Annotations

Value Algorithm Source
amino acid ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000382D878 similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 418.0
  • Bit_score: 804
  • Evalue 5.30e-230
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL72013.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 419.0
  • Bit_score: 798
  • Evalue 4.10e-228
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 418.0
  • Bit_score: 792
  • Evalue 5.00e-227

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGAAGTTCAACCGTGCGCCATTGGCGCGGATCGCCCTTGCCTCCCTGCTTTGCATCTCGGGTGCCGCGCAGGCGCAGCAGCAGACTTACAAGATCGCCTACATCGACCCGCTCTCGGGCCCCTTCGCCAATGTCGGCGAGCTGATGCTGATGCACACGCAGTACGCCATCGAGGACATCAACGCCAAGGGCGGCGTGCTCGGCGGCACGAAGCTGCAGCTGCTGCAGTTCGACAGCAAGCTGTCGGCGCAGGAGAGCCAGAGCGCGCTGCAGGCGGCCATCGACCAGGGCGCGAAGGCGATCGTCACGGGCGGCTCGGGCTCGTCGGTGGTCACGGCGCTGGTGCAATCGGTGGCGCGCTGGAACCAGCGCAACCCGGGCAAGGAACTGATCGTGCTGAACCACTCGTCCATCGACCCCGAGATGACGGGCAAGGCCTGCAGCTTCTGGCACTTCCAGACCGAGGCGAACACGGCGATGAAGATGAAGGCGCTGGCCAACTACATCAAGAAGACGCCCGACGTGAAGAAGGTCTACCTGCTGAACCAGGACTATGCGCACGGCAAGCAATGGGCCAGCTATGGCCGCCAGATGGTGGGCCTGGCGCGGCCGGACATCCAGTTCGTCGGCGAGACGCTGCATCCCATCGGCCGCGTGAAGGACTTCGCGCCGTATGTCGCGAACATCAAGCAGAGCGGCGCGGATTCGGTCATCACCGGCAACTGGGGCCAGGACATGACGCTGCTGCTGAAGGCGGCGGGCGACGCGGGCTACAACCTGCGCTACTTCAATCACAGCGCGGGCTCGGTGCCGGGCACGGTCACGGCCGTGTCGCAGGCGAAGCTGGGGCAGCTGACCTGGGTGGCCGAGTGGCATCCGGGCGAGGCCGACACGCCGAAGGTGGACGCGCTGGCCAAGGCCTACAAGGCCAAGACGGGCAAGGACTTTCTCGCGCCGCGCATCGACATGACGCCGCGCCTGCTGGCCGCGGCCATCAACAAGGCCGGCTCCACGGACACGGTGAAGGTGGCGCACGCGCTCGAAGACCTGATTTTCGATTCGGTGGTGGGGCCGGTGCGCATGCGCGGCGAAGACCATCAGTTGCTGCTGCCGCAGGTGGTCAACACCATTGCGCCAGTCGACGGCAAGACGGTGAAGGTGGGCTGGGAGGGCACGAACTACGGCTTCCGGACTGACGCGGTCTATACCGGGAACGAGCTGGCCCAAGGCACGGAGTGCAAGATGGTCAGGCCCTGA
PROTEIN sequence
Length: 419
MKFNRAPLARIALASLLCISGAAQAQQQTYKIAYIDPLSGPFANVGELMLMHTQYAIEDINAKGGVLGGTKLQLLQFDSKLSAQESQSALQAAIDQGAKAIVTGGSGSSVVTALVQSVARWNQRNPGKELIVLNHSSIDPEMTGKACSFWHFQTEANTAMKMKALANYIKKTPDVKKVYLLNQDYAHGKQWASYGRQMVGLARPDIQFVGETLHPIGRVKDFAPYVANIKQSGADSVITGNWGQDMTLLLKAAGDAGYNLRYFNHSAGSVPGTVTAVSQAKLGQLTWVAEWHPGEADTPKVDALAKAYKAKTGKDFLAPRIDMTPRLLAAAINKAGSTDTVKVAHALEDLIFDSVVGPVRMRGEDHQLLLPQVVNTIAPVDGKTVKVGWEGTNYGFRTDAVYTGNELAQGTECKMVRP*