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SCNpilot_cont_300_bf_scaffold_118_curated_164

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(152670..153545)

Top 3 Functional Annotations

Value Algorithm Source
Putative iron-regulated protein n=1 Tax=Variovorax sp. CF313 RepID=J3CI10_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 281.0
  • Bit_score: 429
  • Evalue 3.20e-117
Variovorax paradoxus strain MEDvA23 contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35613.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 283.0
  • Bit_score: 441
  • Evalue 6.80e-121
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 286.0
  • Bit_score: 420
  • Evalue 4.70e-115

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGGCTCTTTCACGACTCTCGCCCGCGCGGGCTCCCCGCCTCTTCTTTCCCCTGATCGCCACGTTCGCAGCGGCCACCCTCGCCGGTTGTTCGGCGCTGCCGTCCGGCGACGGCGCAGCCGATGCGCCCGGCACGCCCATCGCGCGCCGCGTCGCCGCGCTGCTGCCGGTCGACGCCCTGCTGCTCGGCGAGCAGCACGACGCGCCCGAGCATCACGTCATCGAGCGCGAGACCGTGGAGGCGCTGGTCGCACGCGGCCAGCTCGCCGCGCTGGCGCTCGAGATGGCGGAAGAAGGCCGCGGCACCGCGCATGTCGCGCCCACCGCCACCGAAGCCCAGGTGCAGGCCGCGCTCGACTGGAGCGACAAGGCCTGGCCCTGGGCCAGCTACGGCCCGGCCGTGATGGCCGCCGTGCGCGCGGGCGTGCCGGTGGTCGGCGCCAACCTGCCGCGCGCCCGCATGAAGGACGCGATGGCCGATGTCTCGCTCGACGCCCAGCTCGGCAGCGACGCCTACATCGCGCAGCAGACCGCGGTGCGCGAGGGCCACTGCAAGATGCTGCCCGAGTCGCAGATCATTCCCATGACCCGCATCCAGGTCGGCCGCGACCGCGCGATGGCGCAGGCCGTGGTCAAGGCGCGCCAGCCCGGCAAGACGGTGCTGCTGATCGCCGGCTCCGGCCATGTGGTGCGCACGCTCGGCGTGCCGCAGCACCTGCCGAACGACGTCAGGATCGCCACGGTGCGGATGCTGGCGGCGCCCACGCTGGCGAACGTGGTGCCCGGCGAATACGACCGCATCTGGCAGACGCCGCCCCTGCCCGAGAAAGACTACTGCGCCGAGCTGCGCCGGCCTGCCAAGACCAGCTCGCAGTAA
PROTEIN sequence
Length: 292
MALSRLSPARAPRLFFPLIATFAAATLAGCSALPSGDGAADAPGTPIARRVAALLPVDALLLGEQHDAPEHHVIERETVEALVARGQLAALALEMAEEGRGTAHVAPTATEAQVQAALDWSDKAWPWASYGPAVMAAVRAGVPVVGANLPRARMKDAMADVSLDAQLGSDAYIAQQTAVREGHCKMLPESQIIPMTRIQVGRDRAMAQAVVKARQPGKTVLLIAGSGHVVRTLGVPQHLPNDVRIATVRMLAAPTLANVVPGEYDRIWQTPPLPEKDYCAELRRPAKTSSQ*