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SCNpilot_cont_300_bf_scaffold_118_curated_169

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(157565..158344)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator n=1 Tax=Variovorax sp. CF313 RepID=J2JVW2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 260.0
  • Bit_score: 462
  • Evalue 4.00e-127
Variovorax paradoxus strain MEDvA23 contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35618.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 258.0
  • Bit_score: 466
  • Evalue 3.00e-128
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 256.0
  • Bit_score: 459
  • Evalue 6.20e-127

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGAGACGCTGGCGCATCCATCCCACCGACACCGCGCTGGCCGCCGGCGTGGTCAGCGACGTGCTCGGCGGCGTGGGCACGGCGCACCTGGCCACCAGCTACCTGAAGGCGATGCAGCGCGTGATGCCCGTCACCTTCTGCACCGTGTTCGCGGTGAGCGCGGCGGGGCGCATCGAGGCGGTGTCGGCGGCCAGCAGCTACGGCAGCACGGCCGAGCGCACGTCGGAGCGCTACGTGGCCCAGCGCTTCGACCTGCTCGACCCCAACATGGCCTGGCTCGCGGCGCGCAAGCTGCCGCAGCGCGCGCAGCTGTGGCTGGGCCATCAGCGCGCCGACGAGGTGGCCGACCCCGCCTACCGCGCGGCCTGCTACGGCGACGTGGGCATCCGCGAGCGCGCGTCGGTGCTGTTGCTGCTGCCCACCGGCCAGCGCGTGGCGGTGAGCTTCTACCGGAGCCTGGCGCAGCCCGAGTTCGGCGCGGAAGACTTCGGCCGCATCGAGGCGCATGCGACGCTGCTGGCCGACGCGACCGCCGCGCACGGGCGCAGCGCGATGGCGGTGCGCGAAGCCGTGGAGCCCGCGCTGGCCTCGCGGCTGCTGACGCTGAGCCTGCGCGAGCGCGAAGTCATCGGCCACCTGATGGCGGGCAAGACCGCGAAGGAGGCGGCACGCGAGATCGGCGTGGAGCTGACGACCGTGCGCACCCACCAGTACCGGGCGTTCCGGCGGCTGGGGATACGGTCGCAGAAGGAACTGCTGCGCGGCGCGGGGCCGCACTGA
PROTEIN sequence
Length: 260
MRRWRIHPTDTALAAGVVSDVLGGVGTAHLATSYLKAMQRVMPVTFCTVFAVSAAGRIEAVSAASSYGSTAERTSERYVAQRFDLLDPNMAWLAARKLPQRAQLWLGHQRADEVADPAYRAACYGDVGIRERASVLLLLPTGQRVAVSFYRSLAQPEFGAEDFGRIEAHATLLADATAAHGRSAMAVREAVEPALASRLLTLSLREREVIGHLMAGKTAKEAAREIGVELTTVRTHQYRAFRRLGIRSQKELLRGAGPH*