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SCNpilot_cont_300_bf_scaffold_118_curated_180

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(169996..171900)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8F9_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 634.0
  • Bit_score: 1149
  • Evalue 0.0
Variovorax paradoxus strain MEDvA23 contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35626.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 634.0
  • Bit_score: 1151
  • Evalue 0.0
ABC transporter; K15738 ATP-binding cassette, subfamily F, uup similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 634.0
  • Bit_score: 1149
  • Evalue 0.0

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1905
ATGGCACTCATCACACTCCTCGACGCCCAACTCGCGTTCGGTCACGTCCCGCTGCTGGATCATGCGGACTTTTCTCTTCAGGAATCGGAGCGCGTCGGCCTGATCGGCCGCAACGGCGCCGGCAAGTCTTCGCTGCTCAAGATATTGGGAGGTCTGGAAAAGACCGACGACGGCACCCTGCAGCTTCAGCAGAACCTCCGGGTCGCGTATGTTGCCCAGGAGCCGGTGCTGGACATGGACGCGGACGTCTTCACCGCCGCGAGCCAGGGCCTGGGCCCGGTCATCGCCATCAGAGACCTCTATCTCTCCGGCGCCGACGGCCTGGACCTCGATGCCCTTCAGTCCCAGATCGAAGCCTTCGACGCCTGGAACTGGGAGCAGCGCGTCGAAGAGACGCTGCATCGCCTCCACCTGGACCGCGACGCCCGCGTCGGCTCGCTCTCCGGCGGTACCCGCAAGCGCGTCGCGCTGGCCCAGGCCCTCGTGGCCGCACCCGACGTGCTTCTGCTGGACGAGCCCACCAACCACCTTGACCTCGACTCCATCGAGTGGCTCGAGCAATTGCTGATCGACTTCAAGGGCAGCGTCGTCACCGTCACCCACGACCGCAGCTTCCTGAACCGCGTCGCCACCCGCATCGTCGAACTGGACCGGGGCAAGCTGGGTTCCTATCCAGGCAACTTCGAGCAATACCTCGTGCAGAAGGAAGAGCAACTCGCCCAGGAAGCCGTGATCAGCGCCAAGGCCGACAAGCTGCTCGCCCAGGAAGAAATCTGGATCCGCAAGGGCGTGGAAGCGCGCCGCACACGCAGCCAGAGCCGCATCACCCGCCTGCAGGAACTGCGCGCCAGCCGCTCCGCGCGCCGGGAAGTGCAAGGCAGCGTCAACATGGACGTGGCGTCGGGCCAGTCCAGCGGCAAGATCGTGGCCGAACTCACCGAAGCCACCAAGTCGTTCGGCCCCAAGACGGTCATCCGCAACTTCAGCGGCACCATCCTGCGCGGCGACAAGGTCGGCCTGCTTGGCCCCAACGGCGCGGGCAAGACCACGTTGCTGAAACTGATCCTCGGCGAGCTCGAGCCCGACAGCGGCAAGATCCGCCGCGGCACCAACCTGCAGGTGGCGTACTTCGACCAGATGCGCGACAAGCTTGACCTCGACGCCACGCTTGAAGACTTCATCAGCCCCGGCAGCGAGTGGATCGAGATCGGCAGCCAGAAGAAGCACGTCAAGAGCTATCTCTCCGACTTCCTGTTCTCCCCCGCGCGCGCCAACTCCCCCGTGCGCTCCCTCAGCGGCGGCGAGCGCAACCGTCTGCTGCTGGCACGCCTGTTCGCGCGCCCCGCCAACGTGCTGGTGCTCGACGAGCCGACCAACGACCTCGACATCGACACCCTGGAACTGCTCGAAAACCTGCTGCAGGACTACGACGGCACCGTGTTCCTCGTGAGCCACGACCGGACCTTCCTCGACAACGTGGTCACCAGCACCATCGCCTATGAAGGCGACGGCCGCTGGCGCGAATACGAGGGCAGCGTGCAGGACTGGCTGATCCAGTCCAAGCGCGCGCGAGAGATCGCAGAACAGCGCCAGGCCGCCGCCCCAGCTCCGGCACCCGCCCCCGCGCCAGCCGCGGCCGCGGAACCCGCCGCGCCCAAGGCGGCTGCGGCCCCTCGCAAGAAGCTCTCTTACAAGGAACAGCGCGAACTCGAAGCGCTCCCCGCGCAAATCGAAAGCCTTGAAGCGGAGCAGAAGCGCATCACCGAGATGCTCGAACTCGACGGCGGCGCCATCTACGCGACCGATTCCTCGCGCGCCACCGAGCTCGCCGAGCGCCACGCAAAGATCGACGACGAACTGCTCTCGGCGCTCGAACGACAGGAAGAACTCGGCGCCGGCCGCTGA
PROTEIN sequence
Length: 635
MALITLLDAQLAFGHVPLLDHADFSLQESERVGLIGRNGAGKSSLLKILGGLEKTDDGTLQLQQNLRVAYVAQEPVLDMDADVFTAASQGLGPVIAIRDLYLSGADGLDLDALQSQIEAFDAWNWEQRVEETLHRLHLDRDARVGSLSGGTRKRVALAQALVAAPDVLLLDEPTNHLDLDSIEWLEQLLIDFKGSVVTVTHDRSFLNRVATRIVELDRGKLGSYPGNFEQYLVQKEEQLAQEAVISAKADKLLAQEEIWIRKGVEARRTRSQSRITRLQELRASRSARREVQGSVNMDVASGQSSGKIVAELTEATKSFGPKTVIRNFSGTILRGDKVGLLGPNGAGKTTLLKLILGELEPDSGKIRRGTNLQVAYFDQMRDKLDLDATLEDFISPGSEWIEIGSQKKHVKSYLSDFLFSPARANSPVRSLSGGERNRLLLARLFARPANVLVLDEPTNDLDIDTLELLENLLQDYDGTVFLVSHDRTFLDNVVTSTIAYEGDGRWREYEGSVQDWLIQSKRAREIAEQRQAAAPAPAPAPAPAAAAEPAAPKAAAAPRKKLSYKEQRELEALPAQIESLEAEQKRITEMLELDGGAIYATDSSRATELAERHAKIDDELLSALERQEELGAGR*