ggKbase home page

SCNpilot_cont_300_bf_scaffold_421_curated_13

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 21423..22187

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J3CCQ0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 254.0
  • Bit_score: 433
  • Evalue 2.00e-118
Transcriptional regulator {ECO:0000313|EMBL:EJL68974.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 254.0
  • Bit_score: 433
  • Evalue 2.70e-118
transcriptional regulator, GntR family similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 254.0
  • Bit_score: 426
  • Evalue 4.40e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGCCCCGCGCCAGTTCCAAACCTCCCGTTTCCGACACCTCCCCCGCCGCAGCTGCGGCGCCCGATGACGGCGCCGCGCCGGCGGACAAGCAAAGTTCCATCGAAAGCATCGCCAACGACATCGCCACCGCGATCGTCGAGAAGCGGCTGCCGCCCGGCACCTGGCTGCGCGAAGAAGCGCTGGGCCGCGTCTATTCGGTGAGCCGCACCAAGGTGCGCGCCGCGCTGCTGATGCTGTCGAAGGACAAGCTCATCGAGATGATTCCCGACAAGGGCGCCTTCGTGTGCCAGCCCACCGTGGAAGAGGCACGCGAGGTGTTCGCGGTGCGCCGCATCCTCGAGAGCGAGGTGGTGCGCCTTTTCATCGCCAATGCGCGGCCGCGCGACTACCAGGTGCTTGAGCAGCACATCAAGTTCGAGCGCACCGCGCTGCGCCAGACCACCACCACGGGCACCGTGCGCGAAAAGCTGCTGGGCGACTTCCACGTGGCGCTGGCCGAGGCCACGGGCAACCGCACGCTGGCCGAGCTGGTGCGCGAGCTGGTGGCGCGCAGCTCGCTGATCGCGATGCTCTACCACTCCTCGAACGACCCGCACTGCTCGTCCGACGAGCACGCCGAGTTCCTGCGCCTGTGCCGCAAGGGCGACCCCGAGGCCGCGGTGACCAGCATGATCGAGCACCTCGAACGTATCGAGGCCAGCCTTTCGCTGGACACCGACAAGCCCGACCGCCAGCTCGACCTGGTCAAGGCGCTGCTGGCCTGA
PROTEIN sequence
Length: 255
MPRASSKPPVSDTSPAAAAAPDDGAAPADKQSSIESIANDIATAIVEKRLPPGTWLREEALGRVYSVSRTKVRAALLMLSKDKLIEMIPDKGAFVCQPTVEEAREVFAVRRILESEVVRLFIANARPRDYQVLEQHIKFERTALRQTTTTGTVREKLLGDFHVALAEATGNRTLAELVRELVARSSLIAMLYHSSNDPHCSSDEHAEFLRLCRKGDPEAAVTSMIEHLERIEASLSLDTDKPDRQLDLVKALLA*